RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ADCK5Q3MIX3 580 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 MRPL38Q96DV4 380 aaKnown RBP13.1□□□□□ -0.31
SCFD1-206ENST00000484733 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 SPTBN5Q9NRC6 3674 aaKnown RBP13.09□□□□□ -0.31
SCFD1-206ENST00000484733 TCF20Q9UGU0 1960 aaKnown RBP13.09□□□□□ -0.31
SCFD1-206ENST00000484733 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 GOLGA8AA7E2F4 631 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 H3BNC9 293 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 SREBF1P36956 1147 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 PTPROQ16827 1216 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 EPC2Q52LR7 807 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 CEP55Q53EZ4 464 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 FBXO47Q5MNV8 452 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 MCTP2Q6DN12 878 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 FBXL16Q8N461 479 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 AZI2Q9H6S1 392 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 AGO4Q9HCK5 861 aaKnown RBP13.09□□□□□ -0.31
SCFD1-206ENST00000484733 MTUS1Q9ULD2 1270 aa13.09□□□□□ -0.31
SCFD1-206ENST00000484733 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 ARP10275 920 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 INSRRP14616 1297 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 MARK3P27448 753 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 TMEM192Q8IY95 271 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 DNAJB3Q8WWF6 145 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 IL17RAQ96F46 866 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 PKD2L1Q9P0L9 805 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 PCDHA2Q9Y5H9 948 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 NID2Q14112 1375 aa13.08□□□□□ -0.31
SCFD1-206ENST00000484733 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 IGKV6D-21A0A0A0MT36 114 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 ENPP3O14638 875 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 CYP3A4P08684 503 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 CDC27P30260 824 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 SLC26A2P50443 739 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 ACTR2P61160 394 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
SCFD1-206ENST00000484733 PLCB4Q15147 1175 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-206ENST00000484733 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 CYP2W1Q8TAV3 490 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 NECAB3Q96P71 396 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-206ENST00000484733 CDY2AQ9Y6F7 541 aa13.08□□□□□ -0.32
SCFD1-206ENST00000484733 C5orf67F2Z3F1 127 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 UPP2O95045 317 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 RB1P06400 928 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 GHRP10912 638 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 STAT5BP51692 787 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 ITGB3BPQ13352 177 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-206ENST00000484733 LEXMQ3ZCV2 418 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 TIGD5Q53EQ6 642 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 IER5Q5VY09 327 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 NME8Q8N427 588 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-206ENST00000484733 RC3H2Q9HBD1 1191 aaKnown RBP13.07□□□□□ -0.32
SCFD1-206ENST00000484733 RWDD3Q9Y3V2 267 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 RBAK-RBAKDNI3L0D1 243 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 GPM6BQ13491 265 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 FIBCD1Q8N539 461 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 CRYGNQ8WXF5 182 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 ZNF689Q96CS4 500 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-206ENST00000484733 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
SCFD1-206ENST00000484733 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 COL19A1Q14993 1142 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 ABHD15Q6UXT9 468 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 PGBD1Q96JS3 809 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 AGXT2Q9BYV1 514 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 LMAN2LQ9H0V9 348 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 TMEM260Q9NX78 707 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 TRPV2Q9Y5S1 764 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
SCFD1-206ENST00000484733 LINC00271P0C7V0 271 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 SCG2P13521 617 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 HSPA4P34932 840 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
SCFD1-206ENST00000484733 CLP1Q92989 425 aaKnown RBP13.06□□□□□ -0.32
SCFD1-206ENST00000484733 C1QTNF1Q9BXJ1 281 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
SCFD1-206ENST00000484733 COL1A2P08123 1366 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 POTEB3A0JP26 581 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 ADD1P35611 737 aaKnown RBP13.05□□□□□ -0.32
SCFD1-206ENST00000484733 ZNF76P36508 570 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 IGBP1P78318 339 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
SCFD1-206ENST00000484733 FAM160B1Q5W0V3 765 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 POTEBQ6S5H4 581 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 CRIPAKQ8N1N5 446 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
SCFD1-206ENST00000484733 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 TTC3P53804 2025 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms