RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 POLR3CQ9BUI4 534 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 CUEDC2Q9H467 287 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 MAGEF1Q9HAY2 307 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 SPC25Q9HBM1 224 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 TUFT1Q9NNX1 390 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 KCNH3Q9ULD8 1083 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 HPSEQ9Y251 543 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 PTCH2Q9Y6C5 1203 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 A0A1B0GVL5 298 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 PP2D1A8MPX8 630 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 EML1O00423 815 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 KINO60870 393 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 DUSP11O75319 330 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 ATG7O95352 703 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 CCNE2O96020 404 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 INHAP05111 366 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 SUPT20HL2P0C7V6 817 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 RARBP10826 455 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 SMPD1P17405 629 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 CPT1AP50416 773 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 SP4Q02446 784 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 ARHGAP1Q07960 439 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 CACNB2Q08289 660 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 PRAMEF19Q5SWL8 479 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 FAM160B1Q5W0V3 765 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 TLK2Q86UE8 772 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 IQUBQ8NA54 791 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 SYAP1Q96A49 352 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 EPSTI1Q96J88 318 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 SPATA33Q96N06 139 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 EIF2AK1Q9BQI3 630 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 LXNQ9BS40 222 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 AP5M1Q9H0R1 490 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 ZSWIM4Q9H7M6 989 aa10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 DDX19AQ9NUU7 478 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 GNEQ9Y223 722 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-204ENST00000483955 EMSYQ7Z589 1322 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 IGSF9BQ9UPX0 1349 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 BACH1O14867 736 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 POLR2DO15514 142 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 ZNF202O95125 648 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 CNGA1P29973 690 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 CDC25AP30304 524 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 TIE1P35590 1138 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 TCF7P36402 384 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 STAT6P42226 847 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 QARSP47897 775 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 SLC26A2P50443 739 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 NDUFA8P51970 172 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 LBX1P52954 281 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 PSMC5P62195 406 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 CYP4A11Q02928 519 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 KARSQ15046 597 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 KLHL40Q2TBA0 621 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 SLC9C1Q4G0N8 1177 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 TMEM119Q4V9L6 283 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 RRAGBQ5VZM2 374 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 FBXO46Q6PJ61 603 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 ABHD15Q6UXT9 468 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 PLCD3Q8N3E9 789 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 TRPV1Q8NER1 839 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 COPS5Q92905 334 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 DYDC2Q96IM9 177 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 GPR20Q99678 358 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 HSD17B14Q9BPX1 270 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 MMTAG2Q9BU76 263 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 GOLPH3LQ9H4A5 285 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 AZI2Q9H6S1 392 aa10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 HOOK1Q9UJC3 728 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-204ENST00000483955 IGKV6D-21A0A0A0MT36 114 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 SORBS3O60504 671 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 MED24O75448 989 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 NR1I2O75469 434 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 LYPLA2O95372 231 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 MMP3P08254 477 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 HOXD8P13378 290 aaPredicted RBP10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 LIG1P18858 919 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 PLCG1P19174 1290 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 TRIM32Q13049 653 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 GRB10Q13322 594 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 DGKDQ16760 1214 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 HSDL1Q3SXM5 330 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 USP49Q70CQ1 688 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 CATSPER3Q86XQ3 398 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 CCDC60Q8IWA6 550 aaPredicted RBP10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 TPH2Q8IWU9 490 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 C4orf19Q8IY42 314 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 FMR1NBQ8N0W7 255 aaPredicted RBP10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 PDILTQ8N807 584 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms