RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PPM1BO75688 479 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 PRAMEF1O95521 474 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 CFBP00751 764 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 TP53P04637 393 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 MPOP05164 745 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 EPHX1P07099 455 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 NAT1P18440 290 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 SDHBP21912 280 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 ARL4AP40617 200 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 ID4P47928 161 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 ERVFRD-1P60508 538 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 IL2P60568 153 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 OCRLQ01968 901 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 CHAF1AQ13111 956 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 SNW1Q13573 536 aaKnown RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 CNGB1Q14028 1251 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 ABCB5Q2M3G0 1257 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 CCDC174Q6PII3 467 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 FGD2Q7Z6J4 655 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 BVESQ8NE79 360 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 CXorf38Q8TB03 319 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 FCRL2Q96LA5 508 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 CDC5LQ99459 802 aaKnown RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 NUP88Q99567 741 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 INO80BQ9C086 356 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 NLRC4Q9NPP4 1024 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 SUSD2Q9UGT4 822 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 TCRBV16S1A1N1A0A5B0 115 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 OTOL1A6NHN0 477 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 FADS2P1A8MWK0 482 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 APAF1O14727 1248 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 SLC26A4O43511 780 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 LTFP02788 710 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 CAPNS1P04632 268 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 ENDOUP21128 410 aaKnown RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 KRT85P78386 507 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 ADCY1Q08828 1119 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 TMEM62Q0P6H9 643 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 GRM3Q14832 879 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 PIK3R6Q5UE93 754 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 ZCCHC8Q6NZY4 707 aaKnown RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 CNKSR3Q6P9H4 555 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 C1orf228Q6PIY5 440 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 EPM2AIP1Q7L775 607 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 ADAT2Q7Z6V5 191 aaKnown RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 DDX53Q86TM3 631 aaKnown RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 PNMA8AQ86V59 439 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 C11orf74Q86VG3 221 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 PDILTQ8N807 584 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 ACRBPQ8NEB7 543 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 MZB1Q8WU39 189 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 KCTD13Q8WZ19 329 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 SCLYQ96I15 445 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 CCDC140Q96MF4 163 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 SLC6A18Q96N87 628 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 SELENOOQ9BVL4 669 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 PRDM14Q9GZV8 571 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 AS3MTQ9HBK9 375 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 EPB41L4AQ9HCS5 686 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 DDX21Q9NR30 783 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTCD3-214ENST00000483925 C1orf112Q9NSG2 853 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 ZBTB21Q9ULJ3 1066 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 FAM50BQ9Y247 325 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 MRFAP1Q9Y605 127 aa5.49□□□□□ -1.53
PTCD3-214ENST00000483925 WASHC2AQ641Q2 1341 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 A0A087WZG4 1122 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 ZNF500O60304 480 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 CLEC3AO75596 197 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 FKBP9O95302 570 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 HSPA6P17066 643 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 TYRP1P17643 537 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 LPOP22079 712 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 SERPINB3P29508 390 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 POLR2BP30876 1174 aaKnown RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 GRIA2P42262 883 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 SARSP49591 514 aaKnown RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 CDR1P51861 262 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 AK2P54819 239 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 KLF1Q13351 362 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 LAPTM5Q13571 262 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 INAVAQ3KP66 663 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 HSF5Q4G112 596 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 ATP13A4Q4VNC1 1196 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 ERICH6BQ5W0A0 696 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 DBX2Q6ZNG2 339 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 FKBP9P1Q75LS8 142 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 FAM186BQ8IYM0 893 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 CBARPQ8N350 705 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 VPS37AQ8NEZ2 397 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 HSPBAP1Q96EW2 488 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 AHCYL2Q96HN2 611 aaKnown RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 CHST7Q9NS84 486 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 KLHL11Q9NVR0 708 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 KLHL14Q9P2G3 628 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 SAP30BPQ9UHR5 308 aaKnown RBP5.48□□□□□ -1.53
PTCD3-214ENST00000483925 NRBP1Q9UHY1 535 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 PHTF1Q9UMS5 762 aa5.48□□□□□ -1.53
PTCD3-214ENST00000483925 ZKSCAN5Q9Y2L8 839 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms