RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SMCO2A6NFE2 343 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 GOLGA8AA7E2F4 631 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 GOLGA8BA8MQT2 603 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 INSRRP14616 1297 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 APOBRQ0VD83 1088 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 RPAINQ86UA6 219 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 KCNB2Q92953 911 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 HLA-CQ95604 372 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 IFIH1Q9BYX4 1025 aaKnown RBP20.61■□□□□ 0.89
ATG4B-221ENST00000483778 SLC9A2Q9UBY0 812 aa20.61■□□□□ 0.89
ATG4B-221ENST00000483778 MAFGO15525 162 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 CLK2P49760 499 aaKnown RBP20.6■□□□□ 0.89
ATG4B-221ENST00000483778 ADCY7P51828 1080 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 EPC2Q52LR7 807 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 FBXO22Q8NEZ5 403 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 ANO3Q9BYT9 981 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 AGO3Q9H9G7 860 aaKnown RBP20.6■□□□□ 0.89
ATG4B-221ENST00000483778 AGO4Q9HCK5 861 aaKnown RBP20.6■□□□□ 0.89
ATG4B-221ENST00000483778 JPH1Q9HDC5 661 aaPredicted RBP20.6■□□□□ 0.89
ATG4B-221ENST00000483778 BARHL2Q9NY43 387 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 LMCD1Q9NZU5 365 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 RAPGEFL1Q9UHV5 662 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 TUBE1Q9UJT0 475 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 NAP1L2Q9ULW6 460 aaPredicted RBP20.6■□□□□ 0.89
ATG4B-221ENST00000483778 COG5Q9UP83 839 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 RALGAPA2Q2PPJ7 1873 aa20.6■□□□□ 0.89
ATG4B-221ENST00000483778 MEIS1O00470 390 aa20.59■□□□□ 0.89
ATG4B-221ENST00000483778 ENPP3O14638 875 aa20.59■□□□□ 0.89
ATG4B-221ENST00000483778 PPFIA3O75145 1194 aa20.59■□□□□ 0.89
ATG4B-221ENST00000483778 ACTR2P61160 394 aa20.59■□□□□ 0.89
ATG4B-221ENST00000483778 PLCB4Q15147 1175 aa20.59■□□□□ 0.89
ATG4B-221ENST00000483778 RTN4RL1Q86UN2 441 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-221ENST00000483778 SNX14Q9Y5W7 946 aa20.59■□□□□ 0.89
ATG4B-221ENST00000483778 CDY2AQ9Y6F7 541 aa20.59■□□□□ 0.89
ATG4B-221ENST00000483778 CCNE2O96020 404 aa20.58■□□□□ 0.89
ATG4B-221ENST00000483778 AAK1Q2M2I8 961 aa20.58■□□□□ 0.89
ATG4B-221ENST00000483778 CEP55Q53EZ4 464 aa20.58■□□□□ 0.89
ATG4B-221ENST00000483778 FBXO47Q5MNV8 452 aa20.58■□□□□ 0.89
ATG4B-221ENST00000483778 JAKMIP3Q5VZ66 844 aa20.58■□□□□ 0.89
ATG4B-221ENST00000483778 Q6ZUG5 572 aa20.58■□□□□ 0.89
ATG4B-221ENST00000483778 YME1L1Q96TA2 773 aa20.58■□□□□ 0.89
ATG4B-221ENST00000483778 FAM49AQ9H0Q0 323 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-221ENST00000483778 COL4A6Q14031 1691 aa20.58■□□□□ 0.88
ATG4B-221ENST00000483778 NFASCO94856 1347 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-221ENST00000483778 FAM86B1E9PN63 330 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 ATG7O95352 703 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 FOSP01100 380 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-221ENST00000483778 FAM86B2P0C5J1 330 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 LINC00271P0C7V0 271 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 SREBF1P36956 1147 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 TMEM62Q0P6H9 643 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 PKN1Q16512 942 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 PPP1R18Q6NYC8 613 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 TAF2Q6P1X5 1199 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 TMEM192Q8IY95 271 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 LINC01599Q8WXQ3 324 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 JAKMIP1Q96N16 626 aaKnown RBP20.57■□□□□ 0.88
ATG4B-221ENST00000483778 KIAA1671Q9BY89 1806 aa20.57■□□□□ 0.88
ATG4B-221ENST00000483778 DDX39AO00148 427 aaKnown RBP20.56■□□□□ 0.88
ATG4B-221ENST00000483778 DHX15O43143 795 aaKnown RBP20.56■□□□□ 0.88
ATG4B-221ENST00000483778 MRPS6P82932 125 aaKnown RBP20.56■□□□□ 0.88
ATG4B-221ENST00000483778 KRT32Q14532 448 aa20.56■□□□□ 0.88
ATG4B-221ENST00000483778 PFKFB3Q16875 520 aaPredicted RBP20.56■□□□□ 0.88
ATG4B-221ENST00000483778 CRYGNQ8WXF5 182 aa20.56■□□□□ 0.88
ATG4B-221ENST00000483778 APBB2Q92870 758 aa20.56■□□□□ 0.88
ATG4B-221ENST00000483778 KHSRPQ92945 711 aaKnown RBP eCLIP20.56■□□□□ 0.883e-7■■□□□ 12.3
ATG4B-221ENST00000483778 BRF1Q92994 677 aa20.56■□□□□ 0.88
ATG4B-221ENST00000483778 CD320Q9NPF0 282 aa20.56■□□□□ 0.88
ATG4B-221ENST00000483778 RRN3P2A6NIE6 340 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 CD52P31358 61 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 HSPA4P34932 840 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 STAT5BP51692 787 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 GPM6BQ13491 265 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 PLPPR4Q7Z2D5 763 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 MRPL38Q96DV4 380 aaKnown RBP20.55■□□□□ 0.88
ATG4B-221ENST00000483778 SDF4Q9BRK5 362 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 TRPC6Q9Y210 931 aa20.55■□□□□ 0.88
ATG4B-221ENST00000483778 IGLV3-22A0A075B6J6 115 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 IGKV6D-21A0A0A0MT36 114 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 H3BNC9 293 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 EDIL3O43854 480 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 SCG2P13521 617 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 ATP4AP20648 1035 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 ZNF76P36508 570 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 METAP2P50579 478 aaKnown RBP eCLIP20.54■□□□□ 0.88
ATG4B-221ENST00000483778 ABHD15Q6UXT9 468 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 RSPH3Q86UC2 560 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 PLA2G4DQ86XP0 818 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 PHKBQ93100 1093 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 IL17RAQ96F46 866 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 AZI2Q9H6S1 392 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 UBE2ZQ9H832 354 aaPredicted RBP20.54■□□□□ 0.88
ATG4B-221ENST00000483778 CDHR5Q9HBB8 845 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 PCDHA2Q9Y5H9 948 aa20.54■□□□□ 0.88
ATG4B-221ENST00000483778 HMGB1P09429 215 aaKnown RBP20.53■□□□□ 0.88
ATG4B-221ENST00000483778 FGD1P98174 961 aa20.53■□□□□ 0.88
ATG4B-221ENST00000483778 NTRK3Q16288 839 aa20.53■□□□□ 0.88
ATG4B-221ENST00000483778 TSHZ1Q6ZSZ6 1077 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms