RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 PLEKHN1Q494U1 663 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-217ENST00000483442 AXDND1Q5T1B0 1012 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-217ENST00000483442 CST9Q5W186 159 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 PNMA8AQ86V59 439 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-217ENST00000483442 ADGRG2Q8IZP9 1017 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 CXorf38Q8TB03 319 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 GIPC2Q8TF65 315 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 BRF1Q92994 677 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 BCL2L13Q9BXK5 485 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 CARD11Q9BXL7 1154 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 FAM86C1Q9NVL1 165 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 NARFQ9UHQ1 456 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 INSRP06213 1382 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-217ENST00000483442 ITGB4P16144 1822 aa4.88□□□□□ -1.63
LRCH3-217ENST00000483442 ST20-MTHFSA0A0A6YYL1 179 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 NPHP1O15259 732 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 SASH1O94885 1247 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
LRCH3-217ENST00000483442 HSP90AB1P08238 724 aaKnown RBP4.87□□□□□ -1.63
LRCH3-217ENST00000483442 MAP2K2P36507 400 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 ARL4AP40617 200 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 MTHFSP49914 203 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF445P59923 1031 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF200P98182 395 aaPredicted RBP4.87□□□□□ -1.63
LRCH3-217ENST00000483442 LRRFIP1Q32MZ4 808 aaKnown RBP4.87□□□□□ -1.63
LRCH3-217ENST00000483442 RUFY4Q6ZNE9 571 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 DNAJC10Q8IXB1 793 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 PUS7Q96PZ0 661 aaKnown RBP4.87□□□□□ -1.63
LRCH3-217ENST00000483442 ZNRF3Q9ULT6 936 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 MAP2P11137 1827 aaKnown RBP4.87□□□□□ -1.63
LRCH3-217ENST00000483442 RNF123Q5XPI4 1314 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 BRCA1P38398 1863 aaKnown RBP4.87□□□□□ -1.63
LRCH3-217ENST00000483442 RTL1A6NKG5 1358 aa4.87□□□□□ -1.63
LRCH3-217ENST00000483442 A0A1B0GTL3 188 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 TRAF5O00463 557 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 CA12O43570 354 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 TP53P04637 393 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 GSNP06396 782 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 ATF2P15336 505 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 ERCC3P19447 782 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 CANXP27824 592 aaKnown RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 PMS1P54277 932 aaKnown RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 PLEKHO1Q53GL0 409 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 TBC1D9BQ66K14 1250 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 INTS3Q68E01 1043 aaKnown RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF530Q6P9A1 599 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 GGNQ86UU5 652 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 CCDC144CPQ8IYA2 1237 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 LINC01356Q8N9X3 169 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 FCRL3Q96P31 734 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 SPON2Q9BUD6 331 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 DSCC1Q9BVC3 393 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 BRIP1Q9BX63 1249 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 GP6Q9HCN6 339 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF277Q9NRM2 450 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-217ENST00000483442 PRR13Q9NZ81 148 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF451Q9Y4E5 1061 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF541Q9H0D2 1346 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 FLT4P35916 1363 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 KDRP35968 1356 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 MON2Q7Z3U7 1717 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 CCDC88AQ3V6T2 1871 aa4.86□□□□□ -1.63
LRCH3-217ENST00000483442 FGF10O15520 208 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-217ENST00000483442 PRICKLE3O43900 615 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-217ENST00000483442 DBHP09172 617 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 CYP19A1P11511 503 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-217ENST00000483442 EPS15P42566 896 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 MAPKAPK2P49137 400 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 SLC39A6Q13433 755 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 VWA3BQ502W6 1294 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 ZNF394Q53GI3 561 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 HABP4Q5JVS0 413 aaKnown RBP4.85□□□□□ -1.63
LRCH3-217ENST00000483442 TMCO4Q5TGY1 634 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 OLFM4Q6UX06 510 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 KIAA0825Q8IV33 1275 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 RXFP1Q9HBX9 757 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 LUC7LQ9NQ29 371 aaKnown RBP4.85□□□□□ -1.63
LRCH3-217ENST00000483442 FBLN5Q9UBX5 448 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 SOS1Q07889 1333 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-217ENST00000483442 LTBP3Q9NS15 1303 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 CARMIL3Q8ND23 1372 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 TONSLQ96HA7 1378 aa4.85□□□□□ -1.63
LRCH3-217ENST00000483442 VIRMAQ69YN4 1812 aaKnown RBP4.85□□□□□ -1.63
LRCH3-217ENST00000483442 CASP8AP2Q9UKL3 1982 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 WASHC2AQ641Q2 1341 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 FZD9O00144 591 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 CELF2O95319 508 aaKnown RBP4.84□□□□□ -1.63
LRCH3-217ENST00000483442 SRGNP10124 158 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 IFNGR1P15260 489 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 CD247P20963 164 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 TACR1P25103 407 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 MC3RP41968 323 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 TNNT2P45379 298 aaPredicted RBP4.84□□□□□ -1.63
LRCH3-217ENST00000483442 SLURP1P55000 103 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 ANKRD39Q53RE8 183 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 CCDC93Q567U6 631 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 C1orf141Q5JVX7 400 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 SOGA3Q5TF21 947 aa4.84□□□□□ -1.63
LRCH3-217ENST00000483442 OLFML2BQ68BL8 750 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms