RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CXCL17Q6UXB2 119 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 ZNF365Q70YC5 407 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 FAM133AQ8N9E0 248 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 TRERF1Q96PN7 1200 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 FSD1Q9BTV5 496 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 PBX4Q9BYU1 374 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 KATNBL1Q9H079 304 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 HIPK3Q9H422 1215 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 IL23AQ9NPF7 189 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 A1CFQ9NQ94 594 aaKnown RBP6.93□□□□□ -1.3
CSDE1-207ENST00000483407 PRDM6Q9NQX0 595 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 STX8Q9UNK0 236 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 TTC41PQ6P2S7 1318 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 MUC3AQ02505 3323 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 A0A1B0GTH6 734 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-207ENST00000483407 TTLL8A6PVC2 850 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 GRXCR1A8MXD5 290 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 CTAGE5O15320 804 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 DYNC1LI2O43237 492 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-207ENST00000483407 RECKO95980 971 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 CD4P01730 458 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 TCF3P15923 654 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 CYP2C18P33260 490 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 BEX3Q00994 111 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 ITGA7Q13683 1181 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 SUZ12Q15022 739 aaKnown RBP6.92□□□□□ -1.3
CSDE1-207ENST00000483407 C20orf194Q5TEA3 1177 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 RASIP1Q5U651 963 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 IQSEC1Q6DN90 963 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 RCSD1Q6JBY9 416 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 KCTD1Q719H9 257 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 C16orf59Q7L2K0 433 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
CSDE1-207ENST00000483407 CRIPAKQ8N1N5 446 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 USP38Q8NB14 1042 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 SLC43A3Q8NBI5 491 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 ATXN2LQ8WWM7 1075 aaKnown RBP6.92□□□□□ -1.3
CSDE1-207ENST00000483407 PPM1EQ8WY54 764 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 PIK3R5Q8WYR1 880 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 HERVK_113Q902F9 699 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 CHMP4CQ96CF2 233 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 PRDM12Q9H4Q4 367 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 SLC28A3Q9HAS3 691 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 VTA1Q9NP79 307 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 THEGQ9P2T0 379 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 ADD3Q9UEY8 706 aaKnown RBP6.92□□□□□ -1.3
CSDE1-207ENST00000483407 CCPG1Q9ULG6 757 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 Q9Y3F1 56 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 ZNF536O15090 1300 aa6.92□□□□□ -1.3
CSDE1-207ENST00000483407 BAZ2AQ9UIF9 1905 aaKnown RBP6.91□□□□□ -1.3
CSDE1-207ENST00000483407 CDH23Q9H251 3354 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 RANBP6O60518 1105 aaKnown RBP6.91□□□□□ -1.3
CSDE1-207ENST00000483407 SUPT20HL2P0C7V6 817 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-207ENST00000483407 IDH3AP50213 366 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 CCL23P55773 120 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 CCDC96Q2M329 555 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 BRDTQ58F21 947 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-207ENST00000483407 ZMYM1Q5SVZ6 1142 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 ALG1LQ6GMV1 187 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 NSMFQ6X4W1 530 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 KIAA1211Q6ZU35 1233 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 EEPD1Q7L9B9 569 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 OTOP2Q7RTS6 562 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 FBXO16Q8IX29 292 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-207ENST00000483407 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 HSH2DQ96JZ2 352 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 SEC62Q99442 399 aaKnown RBP6.91□□□□□ -1.3
CSDE1-207ENST00000483407 MPHOSPH6Q99547 160 aaKnown RBP6.91□□□□□ -1.3
CSDE1-207ENST00000483407 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 CYP39A1Q9NYL5 469 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 PARP2Q9UGN5 583 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 PNMA2Q9UL42 364 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 PRR12Q9ULL5 1215 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 ASTN1O14525 1302 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 EYSQ5T1H1 3165 aa6.91□□□□□ -1.3
CSDE1-207ENST00000483407 MYH8P13535 1937 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 SMCHD1A6NHR9 2005 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 LOC102724159A0A0B4J2E5 919 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 B4GALT4O60513 344 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 ICAM1P05362 532 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 NEFLP07196 543 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 PFKMP08237 780 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 MX1P20591 662 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 MSX1P28360 303 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 CPT1AP50416 773 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 ARSDP51689 593 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 SNAP25P60880 206 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 MRPS5P82675 430 aaKnown RBP6.9□□□□□ -1.3
CSDE1-207ENST00000483407 DAB2P98082 770 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 PWP2Q15269 919 aaKnown RBP6.9□□□□□ -1.3
CSDE1-207ENST00000483407 CTC1Q2NKJ3 1217 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 DUSP28Q4G0W2 176 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 MUM1L1Q5H9M0 696 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 TAPT1Q6NXT6 567 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 XKR5Q6UX68 686 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 BTLAQ7Z6A9 289 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 PI4K2BQ8TCG2 481 aa6.9□□□□□ -1.3
CSDE1-207ENST00000483407 ASB2Q96Q27 587 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms