RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CD52P31358 61 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 FBXO47Q5MNV8 452 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 TMTC3Q6ZXV5 915 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 CYP2W1Q8TAV3 490 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 UIMC1Q96RL1 719 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 PCYT2Q99447 389 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 MAP3K14Q99558 947 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 EHMT1Q9H9B1 1298 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 RC3H2Q9HBD1 1191 aaKnown RBP15.96■□□□□ 0.15
VARS-226ENST00000483275 ERAP1Q9NZ08 941 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 UBIAD1Q9Y5Z9 338 aa15.96■□□□□ 0.15
VARS-226ENST00000483275 PIEZO1Q92508 2521 aa15.96■□□□□ 0.14
VARS-226ENST00000483275 EVPLQ92817 2033 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 SPDYE3A6NKU9 549 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 ENPP3O14638 875 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 GPR37L1O60883 481 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 MCM5P33992 734 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 GATMP50440 423 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 DLX2Q07687 328 aaPredicted RBP15.95■□□□□ 0.14
VARS-226ENST00000483275 PAN2Q504Q3 1202 aaKnown RBP15.95■□□□□ 0.14
VARS-226ENST00000483275 TYW1BQ6NUM6 668 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 SEPT1Q8WYJ6 367 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 PABPC5Q96DU9 382 aaKnown RBP15.95■□□□□ 0.14
VARS-226ENST00000483275 TCEANC2Q96MN5 208 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 PCDHA6Q9UN73 950 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 PCDHA8Q9Y5H6 950 aa15.95■□□□□ 0.14
VARS-226ENST00000483275 MBLAC1A4D2B0 266 aaPredicted RBP15.94■□□□□ 0.14
VARS-226ENST00000483275 LINC01565O15544 149 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 INSRRP14616 1297 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 BMPR1AP36894 532 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 LTBRP36941 435 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 GNAQP50148 359 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 MRPS6P82932 125 aaKnown RBP15.94■□□□□ 0.14
VARS-226ENST00000483275 HYAL1Q12794 435 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 BTG3Q14201 252 aaPredicted RBP15.94■□□□□ 0.14
VARS-226ENST00000483275 CREB3L3Q68CJ9 461 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 WWC2Q6AWC2 1192 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 TAF2Q6P1X5 1199 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 TSHZ1Q6ZSZ6 1077 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 GIMAP8Q8ND71 665 aaPredicted RBP15.94■□□□□ 0.14
VARS-226ENST00000483275 LZTS2Q9BRK4 669 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 IGFLR1Q9H665 355 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 JPH1Q9HDC5 661 aaPredicted RBP15.94■□□□□ 0.14
VARS-226ENST00000483275 ALG13Q9NP73 1137 aaKnown RBP15.94■□□□□ 0.14
VARS-226ENST00000483275 TRPC6Q9Y210 931 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 MRPL42Q9Y6G3 142 aaKnown RBP15.94■□□□□ 0.14
VARS-226ENST00000483275 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
VARS-226ENST00000483275 FNDC1Q4ZHG4 1894 aaPredicted RBP15.93■□□□□ 0.14
VARS-226ENST00000483275 TBX10O75333 385 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 ZP2Q05996 745 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 COL19A1Q14993 1142 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 RSPH3Q86UC2 560 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 CDHR1Q96JP9 859 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 TMEM87BQ96K49 555 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 ESYT1Q9BSJ8 1104 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 C11orf84Q9BUA3 381 aaPredicted RBP15.93■□□□□ 0.14
VARS-226ENST00000483275 SMARCAD1Q9H4L7 1026 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 ANO2Q9NQ90 1003 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 JADE2Q9NQC1 790 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 PCDHGC5Q9Y5F6 944 aa15.93■□□□□ 0.14
VARS-226ENST00000483275 POTEB3A0JP26 581 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 C5orf67F2Z3F1 127 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 DDX39AO00148 427 aaKnown RBP15.92■□□□□ 0.14
VARS-226ENST00000483275 ARP10275 920 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 DNAJB1P25685 340 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 SMARCA1P28370 1054 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
VARS-226ENST00000483275 ITGB3BPQ13352 177 aaPredicted RBP15.92■□□□□ 0.14
VARS-226ENST00000483275 TMEM266Q2M3C6 531 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 POTEBQ6S5H4 581 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 RTN4RL1Q86UN2 441 aaPredicted RBP15.92■□□□□ 0.14
VARS-226ENST00000483275 FANCBQ8NB91 859 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 KCNH7Q9NS40 1196 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 TMEM260Q9NX78 707 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 SLC9A2Q9UBY0 812 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 ZNF318Q5VUA4 2279 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 WDR81Q562E7 1941 aa15.92■□□□□ 0.14
VARS-226ENST00000483275 DGKIO75912 1065 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 CALM1P0DP23 149 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 CALM2P0DP24 149 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 CALM3P0DP25 149 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 LIFRP42702 1097 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 NAPAP54920 295 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 ACTR2P61160 394 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 CAMK1Q14012 370 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 PLCB4Q15147 1175 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 ADGRD2Q7Z7M1 963 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 CLP1Q92989 425 aaKnown RBP15.91■□□□□ 0.14
VARS-226ENST00000483275 ZNF689Q96CS4 500 aaPredicted RBP15.91■□□□□ 0.14
VARS-226ENST00000483275 PPP1R16BQ96T49 567 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 TRPV2Q9Y5S1 764 aa15.91■□□□□ 0.14
VARS-226ENST00000483275 MYH9P35579 1960 aaKnown RBP15.91■□□□□ 0.14
VARS-226ENST00000483275 IRS1P35568 1242 aa15.9■□□□□ 0.14
VARS-226ENST00000483275 APOA5Q6Q788 366 aa15.9■□□□□ 0.14
VARS-226ENST00000483275 MXRA8Q9BRK3 442 aa15.9■□□□□ 0.14
VARS-226ENST00000483275 TMX1Q9H3N1 280 aa15.9■□□□□ 0.14
VARS-226ENST00000483275 AZI2Q9H6S1 392 aa15.9■□□□□ 0.14
VARS-226ENST00000483275 HCSTQ9UBK5 93 aa15.9■□□□□ 0.14
VARS-226ENST00000483275 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms