RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 IPO5O00410 1097 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 MEIS1O00470 390 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 BACH1O14867 736 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 PPFIA4O75335 1185 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 TDP2O95551 362 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 MMP1P03956 469 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 ATP2B1P20020 1258 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 CDK7P50613 346 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 FAAP100Q0VG06 881 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 NPY5RQ15761 445 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 NIPA1Q7RTP0 329 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 ANKRD33Q7Z3H0 272 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 FAM126BQ8IXS8 530 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 DIS3L2Q8IYB7 885 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 SEPT1Q8WYJ6 367 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 KAT2BQ92831 832 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 BADQ92934 168 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 TRIM43Q96BQ3 446 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 TOX2Q96NM4 488 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 UBE2OQ9C0C9 1292 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 AZI2Q9H6S1 392 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 SMC3Q9UQE7 1217 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 KIF3AQ9Y496 699 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 SAMM50Q9Y512 469 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 NFASCO94856 1347 aa11.33□□□□□ -0.6
SPTLC1-206ENST00000482632 SCN5AQ14524 2016 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 IGLV3-22A0A075B6J6 115 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 BTBD18B2RXH4 712 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 H3BRB1 525 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 CHMP2AO43633 222 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 CCNT1O60563 726 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 SUPT20HL2P0C7V6 817 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 CYP2C9P11712 490 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 USP11P51784 963 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 ACTR2P61160 394 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 ITGB3BPQ13352 177 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 PTGISQ16647 500 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 NFRKBQ6P4R8 1299 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 TRMT1LQ7Z2T5 733 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 NEK8Q86SG6 692 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 HIPK3Q9H422 1215 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 TUT1Q9H6E5 874 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 DDX25Q9UHL0 483 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-206ENST00000482632 VCANP13611 3396 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 H3BQV1 296 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 M0R2N6 131 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 GAS7O60861 476 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 F2P00734 622 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 SMIM10L2AP0DMW4 78 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 SMIM10L2BP0DMW5 78 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 GJB2P29033 226 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 CYP2C18P33260 490 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 CCL23P55773 120 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 LRCH2Q5VUJ6 765 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 GDF6Q6KF10 455 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 CKAP2LQ8IYA6 745 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 SLC43A3Q8NBI5 491 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 CRYGNQ8WXF5 182 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 GJA10Q969M2 543 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 TEKT3Q9BXF9 490 aa11.31□□□□□ -0.6
SPTLC1-206ENST00000482632 EVPLQ92817 2033 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 TANC1Q9C0D5 1861 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 GSTTP1A0A1W2PQM5 241 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 KIAA0355O15063 1070 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 ZMYND10O75800 440 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 TIMP1P01033 207 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 CD4P01730 458 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 HOXD8P13378 290 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 CIITAP33076 1130 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 IGBP1P78318 339 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 ZNF200P98182 395 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 PTPN11Q06124 597 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 EARS2Q5JPH6 523 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 FAM160B1Q5W0V3 765 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 MIS18BP1Q6P0N0 1132 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 CCDC155Q8N6L0 562 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 ATP6V0A1Q93050 837 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 C16orf70Q9BSU1 422 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 SMARCAD1Q9H4L7 1026 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 TBC1D22BQ9NU19 505 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 GTF2IRD1Q9UHL9 959 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 TBX21Q9UL17 535 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 UMODL1Q5DID0 1318 aa11.3□□□□□ -0.6
SPTLC1-206ENST00000482632 HAS3O00219 553 aa11.29□□□□□ -0.6
SPTLC1-206ENST00000482632 MSH4O15457 936 aa11.29□□□□□ -0.6
SPTLC1-206ENST00000482632 SLC37A4O43826 429 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms