RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CLK2P49760 499 aaKnown RBP15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 HTRA4P83105 476 aaPredicted RBP15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 PFKFB3Q16875 520 aaPredicted RBP15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 MCTP2Q6DN12 878 aa15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 CCDC12Q8WUD4 166 aaPredicted RBP15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 TUBE1Q9UJT0 475 aa15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 COG5Q9UP83 839 aa15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 NFASCO94856 1347 aa15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 NID2Q14112 1375 aa15.34■□□□□ 0.05
CTDSP1-208ENST00000482272 MEIS1O00470 390 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 LPXNO60711 386 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 PPFIA3O75145 1194 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 UPP2O95045 317 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 REC8O95072 547 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 CHRNA1P02708 482 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 ARP10275 920 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 SCG2P13521 617 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 STAT5BP51692 787 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 AKAP17AQ02040 695 aaKnown RBP15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 KRT40Q6A162 431 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 PLPPR4Q7Z2D5 763 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 BRF1Q92994 677 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 ZBTB10Q96DT7 871 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 PCYT2Q99447 389 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 IFIH1Q9BYX4 1025 aaKnown RBP15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 SUGCTQ9HAC7 445 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 AGO4Q9HCK5 861 aaKnown RBP15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 C6orf50Q9HD87 102 aa15.33■□□□□ 0.04
CTDSP1-208ENST00000482272 MBLAC1A4D2B0 266 aaPredicted RBP15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 PRPF3O43395 683 aaKnown RBP15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 INSRRP14616 1297 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 GNA11P29992 359 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 SREBF1P36956 1147 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 ACTR2P61160 394 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 IGBP1P78318 339 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 PKN1Q16512 942 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 JAKMIP3Q5VZ66 844 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 NIPA1Q7RTP0 329 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 FBXL16Q8N461 479 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 ADAMTS19Q8TE59 1207 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 DNAJB3Q8WWF6 145 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 SAMD11Q96NU1 681 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 YME1L1Q96TA2 773 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 AGXT2Q9BYV1 514 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 TRPC6Q9Y210 931 aa15.32■□□□□ 0.04
CTDSP1-208ENST00000482272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 M0QZ92 97 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 ATG7O95352 703 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 SLC26A2P50443 739 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 ITGB3BPQ13352 177 aaPredicted RBP15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 NTRK3Q16288 839 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 MARCH8Q5T0T0 291 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 IER5Q5VY09 327 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 PLA2G4DQ86XP0 818 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 FBXO22Q8NEZ5 403 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 GDPD5Q8WTR4 605 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 HLA-CQ95604 372 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 ZMYND12Q9H0C1 365 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 MUC3AQ02505 3323 aa15.31■□□□□ 0.04
CTDSP1-208ENST00000482272 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 POTEB3A0JP26 581 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 EPB41L2O43491 1005 aaKnown RBP15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 CYP3A4P08684 503 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 GHRP10912 638 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 BMP1P13497 986 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 TFF2Q03403 129 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 MGAT3Q09327 533 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 PLCB4Q15147 1175 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 FAM160B1Q5W0V3 765 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 POTEBQ6S5H4 581 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 CRYGNQ8WXF5 182 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 PHKBQ93100 1093 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 UIMC1Q96RL1 719 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 UHRF1Q96T88 793 aaPredicted RBP15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 C17orf80Q9BSJ5 609 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 PCDHA2Q9Y5H9 948 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 CDY2AQ9Y6F7 541 aa15.3■□□□□ 0.04
CTDSP1-208ENST00000482272 DDX39AO00148 427 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 ENPP3O14638 875 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 BACH1O14867 736 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 EDIL3O43854 480 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 MRPS6P82932 125 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 TOB2Q14106 344 aaPredicted RBP15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 LPIN1Q14693 890 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 FBXO47Q5MNV8 452 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 REXO1Q8N1G1 1221 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 NME8Q8N427 588 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 IL17RAQ96F46 866 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 FAM49AQ9H0Q0 323 aaPredicted RBP15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 NCOA5Q9HCD5 579 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 TBC1D22BQ9NU19 505 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 SQORQ9Y6N5 450 aa15.29■□□□□ 0.04
CTDSP1-208ENST00000482272 ATG2AQ2TAZ0 1938 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms