RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 RUFY3Q7L099 469 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 TMCO2Q7Z6W1 182 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 SP7Q8TDD2 431 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 ATXN2LQ8WWM7 1075 aaKnown RBP11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 SLC9A2Q9UBY0 812 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 MTCH2Q9Y6C9 303 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 INSRRP14616 1297 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 SLC26A2P50443 739 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 ERVK-21P61565 698 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 FGD1P98174 961 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 SP4Q02446 784 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 GRIK4Q16099 956 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 ABHD15Q6UXT9 468 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 RUFY4Q6ZNE9 571 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 SEPT8Q92599 483 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 TOP1MTQ969P6 601 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 IL17RAQ96F46 866 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 PGBD1Q96JS3 809 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 PRDM6Q9NQX0 595 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 LMCD1Q9NZU5 365 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
TMEM39A-207ENST00000482162 RFXAPO00287 272 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 GNA11P29992 359 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 CRIPAKQ8N1N5 446 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 CCDC12Q8WUD4 166 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 APBB2Q92870 758 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 GLG1Q92896 1179 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 PHKBQ93100 1093 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 LENG9Q96B70 501 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 SDF4Q9BRK5 362 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 SUGCTQ9HAC7 445 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 C6orf50Q9HD87 102 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 TUBE1Q9UJT0 475 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 SQORQ9Y6N5 450 aa11.08□□□□□ -0.64
TMEM39A-207ENST00000482162 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 M0R2N6 131 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 IPO5O00410 1097 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 AMHP03971 560 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 CTSHP09668 335 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 ATP4AP20648 1035 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 IGFBP4P22692 258 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 MARK3P27448 753 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 STAT5BP51692 787 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 USP11P51784 963 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 GRB10Q13322 594 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 LPIN1Q14693 890 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 NPY5RQ15761 445 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 PLA2G4DQ86XP0 818 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 REXO1Q8N1G1 1221 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 ARNTL2Q8WYA1 636 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 ASB2Q96Q27 587 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 PCDHA2Q9Y5H9 948 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 CYP46A1Q9Y6A2 500 aa11.07□□□□□ -0.64
TMEM39A-207ENST00000482162 MICAL3Q7RTP6 2002 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 COL4A6Q14031 1691 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 ENPP3O14638 875 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 CCT2P78371 535 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 FBXO47Q5MNV8 452 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 NME8Q8N427 588 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 ATP8B4Q8TF62 1192 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 DNAJB3Q8WWF6 145 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 TGS1Q96RS0 853 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 IFIH1Q9BYX4 1025 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 AZI2Q9H6S1 392 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 TBC1D22BQ9NU19 505 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 PPP4R2Q9NY27 417 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 NAP1L2Q9ULW6 460 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 MAFBQ9Y5Q3 323 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 KDM3AQ9Y4C1 1321 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 BRWD1Q9NSI6 2320 aa11.06□□□□□ -0.64
TMEM39A-207ENST00000482162 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
TMEM39A-207ENST00000482162 SMIM35A0A1B0GVV1 85 aa11.05□□□□□ -0.64
TMEM39A-207ENST00000482162 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
TMEM39A-207ENST00000482162 HBP1O60381 514 aa11.05□□□□□ -0.64
TMEM39A-207ENST00000482162 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms