RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TYW1Q9NV66 732 aaKnown RBP7.92□□□□□ -1.14
SF3B1-210ENST00000482158 SLC5A4Q9NY91 659 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 HSPBP1Q9NZL4 362 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 ALG1L2C9J202 215 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 RAB11FIP3O75154 756 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 PDGFRBP09619 1106 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 TAL1P17542 331 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-210ENST00000482158 STAT5AP42229 794 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 TERF2Q15554 542 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 ZNF174Q15697 407 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 CLRN3Q8NCR9 226 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 SLC5A5Q92911 643 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 TOE1Q96GM8 510 aaKnown RBP7.91□□□□□ -1.14
SF3B1-210ENST00000482158 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 NSUN3Q9H649 340 aaKnown RBP7.91□□□□□ -1.14
SF3B1-210ENST00000482158 ZMAT4Q9H898 229 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 CNTD2Q9H8S5 307 aa7.91□□□□□ -1.14
SF3B1-210ENST00000482158 MBD1Q9UIS9 605 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-210ENST00000482158 PEX10O60683 326 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 KATNA1O75449 491 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 PRKD3O94806 890 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 PHC1P78364 1004 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 MTMR1Q13613 665 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 BROXQ5VW32 411 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 TEPPQ6URK8 271 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 ETV3LQ6ZN32 361 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 C16orf92Q96LL3 132 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 ACSS2Q9NR19 701 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 TOMM22Q9NS69 142 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 BTBD7Q9P203 1132 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 RBPJLQ9UBG7 517 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 PCDHA5Q9Y5H7 936 aa7.9□□□□□ -1.14
SF3B1-210ENST00000482158 PRAMEF25A6NGN4 478 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 C8BP07358 591 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 MMEP08473 750 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 ATF2P15336 505 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 MC3RP41968 323 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 CDR1P51861 262 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 NCKAP1LP55160 1127 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 DBPQ10586 325 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-210ENST00000482158 OLFML2BQ68BL8 750 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 C11orf74Q86VG3 221 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 LDHDQ86WU2 507 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 ASB15Q8WXK1 588 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 CPA5Q8WXQ8 436 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 SYT3Q9BQG1 590 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 EPB41L4BQ9H329 900 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 PCIF1Q9H4Z3 704 aa7.89□□□□□ -1.15
SF3B1-210ENST00000482158 DCP1AQ9NPI6 582 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-210ENST00000482158 LCHNA4D1U4 455 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 FOXP2O15409 715 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 CYP17A1P05093 508 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 HERVK_113P62684 666 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 CACNB2Q08289 660 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-210ENST00000482158 DDB1Q16531 1140 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 MLANAQ16655 118 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 PLEKHG6Q3KR16 790 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 GPR158Q5T848 1215 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 CD276Q5ZPR3 534 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 FERMT3Q86UX7 667 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 CNTD1Q8N815 330 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 FOXRED1Q96CU9 486 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-210ENST00000482158 PUS7LQ9H0K6 701 aaKnown RBP7.88□□□□□ -1.15
SF3B1-210ENST00000482158 CCDC8Q9H0W5 538 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-210ENST00000482158 GCM1Q9NP62 436 aa7.88□□□□□ -1.15
SF3B1-210ENST00000482158 TEX51A0A1B0GUA7 166 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-210ENST00000482158 ULK1O75385 1050 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 NCAM1P13591 858 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 IGFBP6P24592 240 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-210ENST00000482158 AOAHP28039 575 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 FNTBP49356 437 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 EXOSC10Q01780 885 aaKnown RBP7.87□□□□□ -1.15
SF3B1-210ENST00000482158 LRRC32Q14392 662 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 LIPIQ6XZB0 460 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 HDGFL2Q7Z4V5 671 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-210ENST00000482158 RTN4RL1Q86UN2 441 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-210ENST00000482158 IGDCC3Q8IVU1 814 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 ZNF610Q8N9Z0 462 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 SCYL1Q96KG9 808 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 SGPP1Q9BX95 441 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 ASPSCR1Q9BZE9 553 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 RNF38Q9H0F5 515 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 SIRT5Q9NXA8 310 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 FAM53CQ9NYF3 392 aa7.87□□□□□ -1.15
SF3B1-210ENST00000482158 LRRC10BA6NIK2 292 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 K7ESF4 209 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 MPIG6BO95866 241 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 TMEM253P0C7T8 217 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 EPHB3P54753 998 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 SESN3P58005 492 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 ERVK-21P61565 698 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 EPHA7Q15375 998 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 IQSEC1Q6DN90 963 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 CD300LDQ6UXZ3 194 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 PASD1Q8IV76 773 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 RTF1Q92541 710 aaKnown RBP7.86□□□□□ -1.15
SF3B1-210ENST00000482158 GBP4Q96PP9 640 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 YIPF4Q9BSR8 244 aa7.86□□□□□ -1.15
SF3B1-210ENST00000482158 IRF2BPLQ9H1B7 796 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms