RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ANKRD6Q9Y2G4 727 aa4□□□□□ -1.77
SMC6-208ENST00000481708 SIPA1L1O43166 1804 aa4□□□□□ -1.77
SMC6-208ENST00000481708 FAM155AB1AL88 458 aaPredicted RBP4□□□□□ -1.77
SMC6-208ENST00000481708 PYGMP11217 842 aa4□□□□□ -1.77
SMC6-208ENST00000481708 HYAL2Q12891 473 aa4□□□□□ -1.77
SMC6-208ENST00000481708 GTF2H3Q13889 308 aa4□□□□□ -1.77
SMC6-208ENST00000481708 GAS6Q14393 721 aa4□□□□□ -1.77
SMC6-208ENST00000481708 LAPTM4AQ15012 233 aa4□□□□□ -1.77
SMC6-208ENST00000481708 VN1R5Q7Z5H4 357 aa4□□□□□ -1.77
SMC6-208ENST00000481708 SYT9Q86SS6 491 aa4□□□□□ -1.77
SMC6-208ENST00000481708 VWA5B2Q8N398 1253 aa4□□□□□ -1.77
SMC6-208ENST00000481708 IFT122Q9HBG6 1241 aa4□□□□□ -1.77
SMC6-208ENST00000481708 SENP2Q9HC62 589 aa4□□□□□ -1.77
SMC6-208ENST00000481708 PASKQ96RG2 1323 aa4□□□□□ -1.77
SMC6-208ENST00000481708 CDC14CA4D256 554 aa4□□□□□ -1.77
SMC6-208ENST00000481708 PCBP4P57723 403 aaKnown RBP4□□□□□ -1.77
SMC6-208ENST00000481708 SV2CQ496J9 727 aa4□□□□□ -1.77
SMC6-208ENST00000481708 DCAF15Q66K64 600 aa4□□□□□ -1.77
SMC6-208ENST00000481708 CDCA2Q69YH5 1023 aaPredicted RBP4□□□□□ -1.77
SMC6-208ENST00000481708 FSTL4Q6MZW2 842 aa4□□□□□ -1.77
SMC6-208ENST00000481708 POP1Q99575 1024 aaKnown RBP4□□□□□ -1.77
SMC6-208ENST00000481708 CDC6Q99741 560 aa4□□□□□ -1.77
SMC6-208ENST00000481708 MDFIQ99750 246 aa4□□□□□ -1.77
SMC6-208ENST00000481708 MENTQ9BUN1 341 aa4□□□□□ -1.77
SMC6-208ENST00000481708 IGFLR1Q9H665 355 aa4□□□□□ -1.77
SMC6-208ENST00000481708 GMIPQ9P107 970 aa4□□□□□ -1.77
SMC6-208ENST00000481708 TACC3Q9Y6A5 838 aa4□□□□□ -1.77
SMC6-208ENST00000481708 GREB1LQ9C091 1923 aaPredicted RBP4□□□□□ -1.77
SMC6-208ENST00000481708 TRAV20A0A0B4J274 112 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 CRTAMO95727 393 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 FGFR1P11362 822 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 PRIM2P49643 509 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 RBM10P98175 930 aaKnown RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 MPP1Q00013 466 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 ADCY1Q08828 1119 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 GALNT1Q10472 559 aaPredicted RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 ZNF468Q5VIY5 522 aaPredicted RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 CDCP2Q5VXM1 449 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 LRFN4Q6PJG9 635 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 SCUBE1Q8IWY4 988 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 GMCL1Q96IK5 515 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 LRFN3Q9BTN0 628 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 GTPBP4Q9BZE4 634 aaKnown RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 CEP44Q9C0F1 390 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 DNAJB12Q9NXW2 375 aaKnown RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 GJD2Q9UKL4 321 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 TGM5O43548 720 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 NCK2O43639 380 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 OPA1O60313 960 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 NPTXRO95502 500 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 KLF1Q13351 362 aaPredicted RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 ZC3H12BQ5HYM0 836 aaKnown RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 OR8H2Q8N162 312 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 TMEM102Q8N9M5 508 aaPredicted RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 TBC1D20Q96BZ9 403 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 ORAI3Q9BRQ5 295 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 PHAXQ9H814 394 aaKnown RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 TMEM39AQ9NV64 488 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 GPRC5BQ9NZH0 403 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 RABGAP1Q9Y3P9 1069 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 ATG2AQ2TAZ0 1938 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 CHURC1-FNTBB4DL54 471 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 NCAM2O15394 837 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 AP1G1O43747 822 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 B3GALT4O96024 378 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 RAG1P15918 1043 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 TSPAN7P41732 249 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 GPR3P46089 330 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 MAP7Q14244 749 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 SPECC1Q5M775 1068 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 GALNT5Q7Z7M9 940 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 HSPBAP1Q96EW2 488 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 WDR89Q96FK6 387 aaPredicted RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 PLPPR2Q96GM1 343 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 FGD4Q96M96 766 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 PBX4Q9BYU1 374 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 EPN3Q9H201 632 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 SMC4Q9NTJ3 1288 aa3.99□□□□□ -1.77
SMC6-208ENST00000481708 TRMT13Q9NUP7 481 aaKnown RBP3.99□□□□□ -1.77
SMC6-208ENST00000481708 RAB3GAP2Q9H2M9 1393 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 FIBPO43427 364 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 FKBP9O95302 570 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 CTSBP07858 339 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 CYP2C19P33261 490 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 AK2P54819 239 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 EIF5P55010 431 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 APBA1Q02410 837 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 LRRC32Q14392 662 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 NCAPHQ15003 741 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 INTS3Q68E01 1043 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 ZCCHC8Q6NZY4 707 aaKnown RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 FKBP9P1Q75LS8 142 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 SULF2Q8IWU5 870 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 ASAP3Q8TDY4 903 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 MRGPRX3Q96LB0 322 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 HAUS7Q99871 368 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 PDE2AO00408 941 aaPredicted RBP3.98□□□□□ -1.77
SMC6-208ENST00000481708 TLR5O60602 858 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 UBOX5O94941 541 aa3.98□□□□□ -1.77
SMC6-208ENST00000481708 ASLP04424 464 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms