RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 FBXL16Q8N461 479 aa25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 PCYT2Q99447 389 aa25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 AGXT2Q9BYV1 514 aa25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 TSPYL2Q9H2G4 693 aaPredicted RBP25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 C6orf50Q9HD87 102 aa25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 TRPC6Q9Y210 931 aa25.31■■□□□ 1.64
GPCPD1-206ENST00000481690 LOXHD1Q8IVV2 1947 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 ESYT2A0FGR8 921 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 MEIS1O00470 390 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 CCT2P78371 535 aaKnown RBP25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 GRB10Q13322 594 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 MKRN4PQ13434 485 aaPredicted RBP25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 PKN1Q16512 942 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 FAM26DQ5JW98 314 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 PLA2G4DQ86XP0 818 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 REXO1Q8N1G1 1221 aaKnown RBP25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 GDPD5Q8WTR4 605 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 SLC26A6Q9BXS9 759 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 IFIH1Q9BYX4 1025 aaKnown RBP25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 ZMYND12Q9H0C1 365 aa25.3■■□□□ 1.64
GPCPD1-206ENST00000481690 LINC01553A4QN01 128 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 CHRNA1P02708 482 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 GHRP10912 638 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 RUFY3Q7L099 469 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 DNAJB3Q8WWF6 145 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 ATXN2LQ8WWM7 1075 aaKnown RBP25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 APBB2Q92870 758 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 ZBTB10Q96DT7 871 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 UIMC1Q96RL1 719 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 NCOA5Q9HCD5 579 aaKnown RBP25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 INSL6Q9Y581 213 aa25.29■■□□□ 1.64
GPCPD1-206ENST00000481690 NLRC5Q86WI3 1866 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 MYH9P35579 1960 aaKnown RBP25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 MBLAC1A4D2B0 266 aaPredicted RBP25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 FAM86B1E9PN63 330 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 ADAMTS3O15072 1205 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 UPP2O95045 317 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 FAM86B2P0C5J1 330 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 INSRRP14616 1297 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 STAT5BP51692 787 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 MARCH8Q5T0T0 291 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 NIPA1Q7RTP0 329 aa25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 TGS1Q96RS0 853 aaKnown RBP25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 RNF26Q9BY78 433 aaPredicted RBP25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 FAM49AQ9H0Q0 323 aaPredicted RBP25.28■■□□□ 1.64
GPCPD1-206ENST00000481690 TRANK1O15050 2925 aa25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 RRN3P2A6NIE6 340 aa25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 POU3F3P20264 500 aaPredicted RBP25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 GNA11P29992 359 aa25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 PDIA3P30101 505 aaKnown RBP25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 PLCB4Q15147 1175 aa25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 RPAINQ86UA6 219 aa25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 TNPO1Q92973 898 aaKnown RBP25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 CYP46A1Q9Y6A2 500 aa25.27■■□□□ 1.64
GPCPD1-206ENST00000481690 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 BACH1O14867 736 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 EPB41L2O43491 1005 aaKnown RBP25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 IFNAR1P17181 557 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 MRPS5P82675 430 aaKnown RBP25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 MGAT3Q09327 533 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 TOB2Q14106 344 aaPredicted RBP25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 NTRK3Q16288 839 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 MCTP2Q6DN12 878 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 PLPPR4Q7Z2D5 763 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 IL27Q8NEV9 243 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 CCDC148Q8NFR7 591 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 RASGRP4Q8TDF6 673 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 TRAPPC12Q8WVT3 735 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 ASB2Q96Q27 587 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 YME1L1Q96TA2 773 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 ZSWIM6Q9HCJ5 1215 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 VPS54Q9P1Q0 977 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 CDY2AQ9Y6F7 541 aa25.26■■□□□ 1.63
GPCPD1-206ENST00000481690 LPXNO60711 386 aa25.25■■□□□ 1.63
GPCPD1-206ENST00000481690 CCNE2O96020 404 aa25.25■■□□□ 1.63
GPCPD1-206ENST00000481690 CYP3A4P08684 503 aa25.25■■□□□ 1.63
GPCPD1-206ENST00000481690 ERVK-21P61565 698 aa25.25■■□□□ 1.63
GPCPD1-206ENST00000481690 BICD2Q8TD16 824 aa25.25■■□□□ 1.63
GPCPD1-206ENST00000481690 UPF3BQ9BZI7 483 aaKnown RBP25.25■■□□□ 1.63
GPCPD1-206ENST00000481690 TCF20Q9UGU0 1960 aaKnown RBP25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 WDR81Q562E7 1941 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 IGLV3-22A0A075B6J6 115 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 POTEB3A0JP26 581 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 IPO5O00410 1097 aaKnown RBP25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 EVCP57679 992 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 MRPS6P82932 125 aaKnown RBP25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 HTRA4P83105 476 aaPredicted RBP25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 SETQ01105 290 aaPredicted RBP25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 LPIN1Q14693 890 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 FAM160B1Q5W0V3 765 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 POTEBQ6S5H4 581 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 CRYGNQ8WXF5 182 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 TOP1MTQ969P6 601 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 LARP6Q9BRS8 491 aaKnown RBP25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 C17orf80Q9BSJ5 609 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 ZNF577Q9BSK1 485 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 SUGCTQ9HAC7 445 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 EVPLQ92817 2033 aa25.24■■□□□ 1.63
GPCPD1-206ENST00000481690 M0QZ92 97 aa25.23■■□□□ 1.63
GPCPD1-206ENST00000481690 ATG7O95352 703 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms