RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TSPYL2Q9H2G4 693 aaPredicted RBP21.19■□□□□ 0.98
CLK1-211ENST00000481641 SUGCTQ9HAC7 445 aa21.19■□□□□ 0.98
CLK1-211ENST00000481641 AGO4Q9HCK5 861 aaKnown RBP21.19■□□□□ 0.98
CLK1-211ENST00000481641 SIP14410 1827 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 TCF20Q9UGU0 1960 aaKnown RBP21.18■□□□□ 0.98
CLK1-211ENST00000481641 GHRP10912 638 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 SCG2P13521 617 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 RPS6KB1P23443 525 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 SREBF1P36956 1147 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 ACTR2P61160 394 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 PKN1Q16512 942 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 PHKBQ93100 1093 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 C17orf80Q9BSJ5 609 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 IFIH1Q9BYX4 1025 aaKnown RBP21.18■□□□□ 0.98
CLK1-211ENST00000481641 TUBE1Q9UJT0 475 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 INSL6Q9Y581 213 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 XIRP2A4UGR9 3374 aa21.18■□□□□ 0.98
CLK1-211ENST00000481641 MBLAC1A4D2B0 266 aaPredicted RBP21.17■□□□□ 0.98
CLK1-211ENST00000481641 DDX39AO00148 427 aaKnown RBP21.17■□□□□ 0.98
CLK1-211ENST00000481641 MEIS1O00470 390 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 INSRRP14616 1297 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 ZNF76P36508 570 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 HTRA4P83105 476 aaPredicted RBP21.17■□□□□ 0.98
CLK1-211ENST00000481641 MGAT3Q09327 533 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 AP3B2Q13367 1082 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 TAF2Q6P1X5 1199 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 TRAPPC12Q8WVT3 735 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 AZI2Q9H6S1 392 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 NFASCO94856 1347 aa21.17■□□□□ 0.98
CLK1-211ENST00000481641 CCDC196A0A1B0GTZ2 297 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 FAM86B1E9PN63 330 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 FAM86B2P0C5J1 330 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 LPIN1Q14693 890 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 PLCB4Q15147 1175 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 RPAINQ86UA6 219 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 ADAMTS19Q8TE59 1207 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 TOP1MTQ969P6 601 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 FAM49AQ9H0Q0 323 aaPredicted RBP21.16■□□□□ 0.98
CLK1-211ENST00000481641 GLT8D2Q9H1C3 349 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 TRPC6Q9Y210 931 aa21.16■□□□□ 0.98
CLK1-211ENST00000481641 PRPF3O43395 683 aaKnown RBP21.15■□□□□ 0.98
CLK1-211ENST00000481641 CCNE2O96020 404 aa21.15■□□□□ 0.98
CLK1-211ENST00000481641 STAT5BP51692 787 aa21.15■□□□□ 0.98
CLK1-211ENST00000481641 KCNQ1P51787 676 aa21.15■□□□□ 0.98
CLK1-211ENST00000481641 RSPH3Q86UC2 560 aa21.15■□□□□ 0.98
CLK1-211ENST00000481641 PLA2G4DQ86XP0 818 aa21.15■□□□□ 0.98
CLK1-211ENST00000481641 SP7Q8TDD2 431 aaPredicted RBP21.15■□□□□ 0.98
CLK1-211ENST00000481641 AGXT2Q9BYV1 514 aa21.15■□□□□ 0.98
CLK1-211ENST00000481641 NCOA5Q9HCD5 579 aaKnown RBP21.15■□□□□ 0.98
CLK1-211ENST00000481641 CDY2AQ9Y6F7 541 aa21.15■□□□□ 0.98
CLK1-211ENST00000481641 MUC3AQ02505 3323 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 REC8O95072 547 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 CCT2P78371 535 aaKnown RBP21.14■□□□□ 0.97
CLK1-211ENST00000481641 TMEM62Q0P6H9 643 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 NTRK3Q16288 839 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 TEX2Q8IWB9 1127 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 RASGRP4Q8TDF6 673 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 APBB2Q92870 758 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 NECAB3Q96P71 396 aaPredicted RBP21.14■□□□□ 0.97
CLK1-211ENST00000481641 YME1L1Q96TA2 773 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 ZMYND12Q9H0C1 365 aa21.14■□□□□ 0.97
CLK1-211ENST00000481641 NID2Q14112 1375 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 RRN3P2A6NIE6 340 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 TNFRSF10AO00220 468 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 ATG7O95352 703 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 BMP1P13497 986 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 PSMA5P28066 241 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 FBXO47Q5MNV8 452 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 PLPPR4Q7Z2D5 763 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 FBXL16Q8N461 479 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 FBXO22Q8NEZ5 403 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 CRYGNQ8WXF5 182 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 UHRF1Q96T88 793 aaPredicted RBP21.13■□□□□ 0.97
CLK1-211ENST00000481641 SLC26A6Q9BXS9 759 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 C6orf50Q9HD87 102 aa21.13■□□□□ 0.97
CLK1-211ENST00000481641 IGLV3-22A0A075B6J6 115 aa21.12■□□□□ 0.97
CLK1-211ENST00000481641 ESYT2A0FGR8 921 aa21.12■□□□□ 0.97
CLK1-211ENST00000481641 DHX15O43143 795 aaKnown RBP21.12■□□□□ 0.97
CLK1-211ENST00000481641 CYP3A4P08684 503 aa21.12■□□□□ 0.97
CLK1-211ENST00000481641 PDIA3P30101 505 aaKnown RBP21.12■□□□□ 0.97
CLK1-211ENST00000481641 MRPS6P82932 125 aaKnown RBP21.12■□□□□ 0.97
CLK1-211ENST00000481641 ABHD15Q6UXT9 468 aa21.12■□□□□ 0.97
CLK1-211ENST00000481641 NIPA1Q7RTP0 329 aa21.12■□□□□ 0.97
CLK1-211ENST00000481641 LARP6Q9BRS8 491 aaKnown RBP21.12■□□□□ 0.97
CLK1-211ENST00000481641 AGO3Q9H9G7 860 aaKnown RBP21.12■□□□□ 0.97
CLK1-211ENST00000481641 BRWD1Q9NSI6 2320 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 IGKV6D-21A0A0A0MT36 114 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 POTEB3A0JP26 581 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 ENPP3O14638 875 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 BACH1O14867 736 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 CD52P31358 61 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 AKAP17AQ02040 695 aaKnown RBP21.11■□□□□ 0.97
CLK1-211ENST00000481641 TOB2Q14106 344 aaPredicted RBP21.11■□□□□ 0.97
CLK1-211ENST00000481641 EPC2Q52LR7 807 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 POTEBQ6S5H4 581 aa21.11■□□□□ 0.97
CLK1-211ENST00000481641 CCDC60Q8IWA6 550 aaPredicted RBP21.11■□□□□ 0.97
CLK1-211ENST00000481641 REXO1Q8N1G1 1221 aaKnown RBP21.11■□□□□ 0.97
CLK1-211ENST00000481641 LMCD1Q9NZU5 365 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms