RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 FAAP100Q0VG06 881 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 DGKDQ16760 1214 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 LETM2Q2VYF4 491 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
SSBP1-210ENST00000481508 NEK8Q86SG6 692 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 FAM184AQ8NB25 1140 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 FBXO18Q8NFZ0 1043 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 CDHR1Q96JP9 859 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 CTAGE1Q96RT6 745 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 JPH1Q9HDC5 661 aaPredicted RBP12.01□□□□□ -0.49
SSBP1-210ENST00000481508 TRMT13Q9NUP7 481 aaKnown RBP12.01□□□□□ -0.49
SSBP1-210ENST00000481508 NFASCO94856 1347 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 SIP14410 1827 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 XIRP2A4UGR9 3374 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 MYH15Q9Y2K3 1946 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 CYP3A7-CYP3A51PA0A087WV96 503 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 B4GALT4O60513 344 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 CD4P01730 458 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 CYP3A7P24462 503 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 TCF7P36402 384 aaPredicted RBP12□□□□□ -0.49
SSBP1-210ENST00000481508 USP11P51784 963 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 TRIM29Q14134 588 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 MFSD10Q14728 455 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 Q4G0T1 1027 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 BRDTQ58F21 947 aaPredicted RBP12□□□□□ -0.49
SSBP1-210ENST00000481508 TJAP1Q5JTD0 557 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 ANKRD33Q7Z3H0 272 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 IL27Q8NEV9 243 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 ETNPPLQ8TBG4 499 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 SNX21Q969T3 373 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 ZNF577Q9BSK1 485 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 HDAC6Q9UBN7 1215 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 SLC9A2Q9UBY0 812 aa12□□□□□ -0.49
SSBP1-210ENST00000481508 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 K7ELQ4 463 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 NOP56O00567 594 aaKnown RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 MAFGO15525 162 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 KPNA6O60684 536 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 PPFIA4O75335 1185 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 ACTR2P61160 394 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 ZNF200P98182 395 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 SETQ01105 290 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 NBR1Q14596 966 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 KIAA0753Q2KHM9 967 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 GDF6Q6KF10 455 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 MOXD1Q6UVY6 613 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 GIMAP8Q8ND71 665 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 SLC5A5Q92911 643 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 SDF4Q9BRK5 362 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 BRMS1Q9HCU9 246 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 PRDM5Q9NQX1 630 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
SSBP1-210ENST00000481508 TBX21Q9UL17 535 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 SMC3Q9UQE7 1217 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 UMODL1Q5DID0 1318 aa11.99□□□□□ -0.49
SSBP1-210ENST00000481508 EVPLQ92817 2033 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 LOXHD1Q8IVV2 1947 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 CCNT1O60563 726 aaKnown RBP11.98□□□□□ -0.49
SSBP1-210ENST00000481508 LGR5O75473 907 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 ATG7O95352 703 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 CLTBP09497 229 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 CYP2C9P11712 490 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 MARK3P27448 753 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 FAM47CQ5HY64 1035 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 SEPT1Q8WYJ6 367 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
SSBP1-210ENST00000481508 HAS1Q92839 578 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 WNT8BQ93098 351 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 TOX2Q96NM4 488 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 UNC45AQ9H3U1 944 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 RNPEPQ9H4A4 650 aa11.98□□□□□ -0.49
SSBP1-210ENST00000481508 H3BRB1 525 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 KIAA0355O15063 1070 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 PSMD10O75832 226 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 SUPT20HL2P0C7V6 817 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 SMIM10L2AP0DMW4 78 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 SMIM10L2BP0DMW5 78 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 ATP2B1P20020 1258 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 TOB1P50616 345 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-210ENST00000481508 UGCGQ16739 394 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 PPP4R3AQ6IN85 833 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 NFRKBQ6P4R8 1299 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 B3GNT9Q6UX72 402 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 ABHD15Q6UXT9 468 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 SESTD1Q86VW0 696 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 CCDC60Q8IWA6 550 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-210ENST00000481508 TET1Q8NFU7 2136 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 ZBTB10Q96DT7 871 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 TMEM60Q9H2L4 133 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 FOXP1Q9H334 677 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-210ENST00000481508 TUT1Q9H6E5 874 aaKnown RBP11.97□□□□□ -0.49
SSBP1-210ENST00000481508 KCNMB3Q9NPA1 279 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 VAV3Q9UKW4 847 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 ARID2Q68CP9 1835 aa11.97□□□□□ -0.49
SSBP1-210ENST00000481508 CHD7Q9P2D1 2997 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms