RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 COL1A2P08123 1366 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 IPO5O00410 1097 aaKnown RBP13.01□□□□□ -0.33
CCM2-213ENST00000480658 IGFBP4P22692 258 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 STAT5BP51692 787 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 USP11P51784 963 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 ACTR2P61160 394 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 SSRP1Q08945 709 aaKnown RBP13.01□□□□□ -0.33
CCM2-213ENST00000480658 TYW1BQ6NUM6 668 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 ZNF746Q6NUN9 644 aaPredicted RBP13.01□□□□□ -0.33
CCM2-213ENST00000480658 TRAF7Q6Q0C0 670 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 PPP1R13LQ8WUF5 828 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 ZNF577Q9BSK1 485 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 SLC26A6Q9BXS9 759 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
CCM2-213ENST00000480658 GSTTP1A0A1W2PQM5 241 aa13□□□□□ -0.33
CCM2-213ENST00000480658 ATG7O95352 703 aa13□□□□□ -0.33
CCM2-213ENST00000480658 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
CCM2-213ENST00000480658 ZNF200P98182 395 aaPredicted RBP13□□□□□ -0.33
CCM2-213ENST00000480658 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
CCM2-213ENST00000480658 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
CCM2-213ENST00000480658 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
CCM2-213ENST00000480658 PLA2G4DQ86XP0 818 aa13□□□□□ -0.33
CCM2-213ENST00000480658 DBF4BQ8NFT6 615 aa13□□□□□ -0.33
CCM2-213ENST00000480658 WASF1Q92558 559 aa13□□□□□ -0.33
CCM2-213ENST00000480658 FAM167AQ96KS9 214 aa13□□□□□ -0.33
CCM2-213ENST00000480658 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
CCM2-213ENST00000480658 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
CCM2-213ENST00000480658 SCN5AQ14524 2016 aa13□□□□□ -0.33
CCM2-213ENST00000480658 GBF1Q92538 1859 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 POTEB3A0JP26 581 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 BACH1O14867 736 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 HBP1O60381 514 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 PSAPP07602 524 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 CTSHP09668 335 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 MARK3P27448 753 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 SFNP31947 248 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 CIITAP33076 1130 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 NLRP5P59047 1200 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 TAP1Q03518 808 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 MBTPS1Q14703 1052 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 GPNMBQ14956 572 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 NTRK3Q16288 839 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 POTEBQ6S5H4 581 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 MYOCDQ8IZQ8 938 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 CRYGNQ8WXF5 182 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 YME1L1Q96TA2 773 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
CCM2-213ENST00000480658 ZNF302Q9NR11 478 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 COG5Q9UP83 839 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 PCDHA2Q9Y5H9 948 aa12.99□□□□□ -0.33
CCM2-213ENST00000480658 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 IGLV3-22A0A075B6J6 115 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 IGKV6D-21A0A0A0MT36 114 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 SMIM35A0A1B0GVV1 85 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 WDR64B1ANS9 1081 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 FAM86B1E9PN63 330 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 FAM86B2P0C5J1 330 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 INSRRP14616 1297 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 MYOGP15173 224 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 JAK3P52333 1124 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 MRPS5P82675 430 aaKnown RBP12.98□□□□□ -0.33
CCM2-213ENST00000480658 MRPS6P82932 125 aaKnown RBP12.98□□□□□ -0.33
CCM2-213ENST00000480658 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
CCM2-213ENST00000480658 PKN1Q16512 942 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 PTPROQ16827 1216 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 ZNF484Q5JVG2 852 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 MOXD1Q6UVY6 613 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
CCM2-213ENST00000480658 ARNTL2Q8WYA1 636 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 WNT8BQ93098 351 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 PHKBQ93100 1093 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 RIT2Q99578 217 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 BCAS3Q9H6U6 928 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 PCDHA4Q9UN74 947 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 PCDHA10Q9Y5I2 948 aa12.98□□□□□ -0.33
CCM2-213ENST00000480658 STK36Q9NRP7 1315 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 ARP10275 920 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 CPA1P15085 419 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 TMOD1P28289 359 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 ERVK-21P61565 698 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 DEFB103AP81534 67 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 HTRA4P83105 476 aaPredicted RBP12.97□□□□□ -0.33
CCM2-213ENST00000480658 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
CCM2-213ENST00000480658 TOB2Q14106 344 aaPredicted RBP12.97□□□□□ -0.33
CCM2-213ENST00000480658 HIC1Q14526 733 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 PDXDC2PQ6P474 469 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 CYP2W1Q8TAV3 490 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
CCM2-213ENST00000480658 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 BRMS1Q9HCU9 246 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 TMEM260Q9NX78 707 aa12.97□□□□□ -0.33
CCM2-213ENST00000480658 SAMM50Q9Y512 469 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms