RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 MTIF2P46199 727 aaKnown RBP11.12□□□□□ -0.63
COMMD4-203ENST00000480484 DNM2P50570 870 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 FUT2Q10981 343 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 KCTD2Q14681 263 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 SEC23AQ15436 765 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 ODF2Q5BJF6 829 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 CYB5D1Q6P9G0 228 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 IFT20Q8IY31 132 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 PGBD3Q8N328 593 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 RMND1Q9NWS8 449 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 A0A1B0GUL6 1792 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 ATXN2Q99700 1313 aaKnown RBP11.12□□□□□ -0.63
COMMD4-203ENST00000480484 A0A1W2PQC6 194 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 GOLGA6L10A6NI86 522 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 FCER1AP12319 257 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 STAT6P42226 847 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 RASSF7Q02833 373 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 ZNF394Q53GI3 561 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 CCDC170Q8IYT3 715 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 CSGALNACT2Q8N6G5 542 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 PAF1Q8N7H5 531 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 TBC1D31Q96DN5 1066 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 CYFIP2Q96F07 1278 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 TSGA10Q9BZW7 698 aa11.12□□□□□ -0.63
COMMD4-203ENST00000480484 FAM107AO95990 144 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 TCP1P17987 556 aaKnown RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PRDX5P30044 214 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 ZBED6P86452 979 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 MEA1Q16626 185 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 SPRED3Q2MJR0 410 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 YTHDF3Q7Z739 585 aaKnown RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 ZNF507Q8TCN5 953 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 CAVIN3Q969G5 261 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 TACO1Q9BSH4 297 aaKnown RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 GOLPH3Q9H4A6 298 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 LRRC4CQ9HCJ2 640 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PACSIN2Q9UNF0 486 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 MYH6P13533 1939 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 OPLAHO14841 1288 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 TOMM20Q15388 145 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 NAIF1Q69YI7 327 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 ATP6V1G3Q96LB4 118 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PTPRHQ9HD43 1115 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 FAM207AQ9NSI2 230 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 USP17L12C9JPN9 530 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 USP17L21D6R901 530 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 P4HBP07237 508 aaKnown RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 TMOD1P28289 359 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 MECOMQ03112 1051 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PAK2Q13177 524 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 EAPPQ56P03 285 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PCGF5Q86SE9 256 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 MCF2L2Q86YR7 1114 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 FUKQ8N0W3 1084 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 IQCKQ8N0W5 287 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 OR2W6PQ8NHA6 318 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 SH2D4AQ9H788 454 aa11.11□□□□□ -0.63
COMMD4-203ENST00000480484 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-203ENST00000480484 PDS5AQ29RF7 1337 aaKnown RBP11.1□□□□□ -0.63
COMMD4-203ENST00000480484 PSMA7O14818 248 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 SLC35G1Q2M3R5 365 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 CAVIN4Q5BKX8 364 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 TEX11Q8IYF3 940 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 ADSSL1Q8N142 457 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 DEPDC4Q8N2C3 294 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 C8orf48Q96LL4 319 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 GPR101Q96P66 508 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-203ENST00000480484 PURBQ96QR8 312 aaKnown RBP11.1□□□□□ -0.63
COMMD4-203ENST00000480484 KRT12Q99456 494 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 CENPOQ9BU64 300 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 NOC4LQ9BVI4 516 aaKnown RBP11.1□□□□□ -0.63
COMMD4-203ENST00000480484 PLAAQ9Y263 795 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 DNM1LO00429 736 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 SRGNP10124 158 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 EIF4A3P38919 411 aaKnown RBP11.1□□□□□ -0.63
COMMD4-203ENST00000480484 KIF11P52732 1056 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 ESR2Q92731 530 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 DDX12PQ92771 950 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-203ENST00000480484 PHF20Q9BVI0 1012 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 DUOX1Q9NRD9 1551 aa11.1□□□□□ -0.63
COMMD4-203ENST00000480484 A0A1B0GUA9 196 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 BMP15O95972 392 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 MAGEA1P43355 309 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 CFAP221Q4G0U5 840 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 WLSQ5T9L3 541 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 ARMC3Q5W041 872 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 NSUN4Q96CB9 384 aaKnown RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
COMMD4-203ENST00000480484 TRIM6Q9C030 488 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-203ENST00000480484 TGIF2Q9GZN2 237 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms