RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TBX3O15119 743 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 NEMFO60524 1076 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
TRA2B-212ENST00000480461 ITGB8P26012 769 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 TXKP42681 527 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 EPHB4P54760 987 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
TRA2B-212ENST00000480461 CALCRLQ16602 461 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 C1orf53Q5VUE5 145 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 LRCH2Q5VUJ6 765 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 SEPT1Q8WYJ6 367 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
TRA2B-212ENST00000480461 USP28Q96RU2 1077 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
TRA2B-212ENST00000480461 TSEN34Q9BSV6 310 aaKnown RBP13.81□□□□□ -0.2
TRA2B-212ENST00000480461 GAS7O60861 476 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 MYL3P08590 195 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 ATP4AP20648 1035 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 DNAJB2P25686 324 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 CPT1AP50416 773 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 PSMC6P62333 389 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
TRA2B-212ENST00000480461 TRIM50Q86XT4 487 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
TRA2B-212ENST00000480461 SPC25Q9HBM1 224 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 PCDHA12Q9UN75 941 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 DOCK5Q9H7D0 1870 aa13.8□□□□□ -0.2
TRA2B-212ENST00000480461 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 A0A1W2PQ45 241 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 A0A1W2PQY0 241 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 LGR5O75473 907 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 ZNF286BP0CG31 522 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 TCF7P36402 384 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 TECP42680 631 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 ATP2C1P98194 919 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 DNM1Q05193 864 aaKnown RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 GRIN1Q05586 938 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 PPP2R5CQ13362 524 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 ORC2Q13416 577 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 HIC1Q14526 733 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 DGKDQ16760 1214 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 UTP14CQ5TAP6 766 aaKnown RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 ZNF746Q6NUN9 644 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 PCSK9Q8NBP7 692 aaKnown RBP13.79□□□□□ -0.2
TRA2B-212ENST00000480461 TEKT3Q9BXF9 490 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
TRA2B-212ENST00000480461 HAS3O00219 553 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 NOP56O00567 594 aaKnown RBP13.78□□□□□ -0.2
TRA2B-212ENST00000480461 CHMP2AO43633 222 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 STBD1O95210 358 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 BAG4O95429 457 aaKnown RBP13.78□□□□□ -0.2
TRA2B-212ENST00000480461 LGALS2P05162 132 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 KRT76Q01546 638 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 TLE2Q04725 743 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 UGCGQ16739 394 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 CCDC60Q8IWA6 550 aaPredicted RBP13.78□□□□□ -0.2
TRA2B-212ENST00000480461 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 WRAP73Q9P2S5 460 aaPredicted RBP13.78□□□□□ -0.2
TRA2B-212ENST00000480461 PCDHA10Q9Y5I2 948 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 ELP1O95163 1332 aa13.78□□□□□ -0.2
TRA2B-212ENST00000480461 CHD9Q3L8U1 2897 aa13.77□□□□□ -0.2
TRA2B-212ENST00000480461 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 POTEMA6NI47 508 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 H3BRB1 525 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 ZNF862O60290 1169 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 MARCH6O60337 910 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 KPNA6O60684 536 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 F2P00734 622 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 CLTBP09497 229 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-212ENST00000480461 CDC25AP30304 524 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 NASPP49321 788 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-212ENST00000480461 CDK7P50613 346 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 SLC43A3Q8NBI5 491 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 LINC00301Q8NCQ3 95 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 ADAMTS19Q8TE59 1207 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
TRA2B-212ENST00000480461 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-212ENST00000480461 ZNF576Q9H609 170 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 TUT1Q9H6E5 874 aaKnown RBP13.77□□□□□ -0.21
TRA2B-212ENST00000480461 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 RGL1Q9NZL6 768 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 THEGQ9P2T0 379 aa13.77□□□□□ -0.21
TRA2B-212ENST00000480461 MAFBQ9Y5Q3 323 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-212ENST00000480461 A0A087WWV3 80 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 RBAK-RBAKDNI3L0D1 243 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 ZBTB39O15060 712 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 KIAA0355O15063 1070 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 ZEB2O60315 1214 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 SLITRK3O94933 977 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms