RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 BECN1Q14457 450 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 SAFBQ15424 915 aaKnown RBP eCLIP10.3□□□□□ -0.76
VCP-206ENST00000480327 EARS2Q5JPH6 523 aaKnown RBP10.3□□□□□ -0.76
VCP-206ENST00000480327 PCNX4Q63HM2 1172 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
VCP-206ENST00000480327 MCTP1Q6DN14 999 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 GALNT17Q6IS24 598 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 PIK3AP1Q6ZUJ8 805 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 VSIG10LQ86VR7 867 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 RETREG2Q8NC44 543 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 FBXO18Q8NFZ0 1043 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 AFAP1L1Q8TED9 768 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 INTS4Q96HW7 963 aaKnown RBP10.3□□□□□ -0.76
VCP-206ENST00000480327 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 EPHX3Q9H6B9 360 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 HDAC6Q9UBN7 1215 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 LOXHD1Q8IVV2 1947 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 FRMPD4Q14CM0 1322 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 KAT6AQ92794 2004 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 KIAA1671Q9BY89 1806 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 CCDC194A0A1B0GVG4 234 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 VPS37CA5D8V6 355 aaPredicted RBP10.29□□□□□ -0.76
VCP-206ENST00000480327 KIF28PB7ZC32 967 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 M0R2N6 131 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 EIF3JO75822 258 aaKnown RBP10.29□□□□□ -0.76
VCP-206ENST00000480327 BAIAP3O94812 1187 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 GH1P01241 217 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 CKBP12277 381 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 HOXD8P13378 290 aaPredicted RBP10.29□□□□□ -0.76
VCP-206ENST00000480327 SREBF1P36956 1147 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 PSEN2P49810 448 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 ARHGAP4P98171 946 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 ZNF200P98182 395 aaPredicted RBP10.29□□□□□ -0.76
VCP-206ENST00000480327 NONOQ15233 471 aaKnown RBP eCLIP10.29□□□□□ -0.76
VCP-206ENST00000480327 INF2Q27J81 1249 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 BRDTQ58F21 947 aaPredicted RBP10.29□□□□□ -0.76
VCP-206ENST00000480327 MCTP2Q6DN12 878 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 LRRC8DQ7L1W4 858 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 KRT25Q7Z3Z0 450 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 FAM177A1Q8N128 213 aaPredicted RBP10.29□□□□□ -0.76
VCP-206ENST00000480327 CYP2W1Q8TAV3 490 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 TBCKQ8TEA7 893 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 GDPD5Q8WTR4 605 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 EMID1Q96A84 441 aaPredicted RBP10.29□□□□□ -0.76
VCP-206ENST00000480327 OSBPL7Q9BZF2 842 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 CD320Q9NPF0 282 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 GTF2IRD1Q9UHL9 959 aa10.29□□□□□ -0.76
VCP-206ENST00000480327 F2P00734 622 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 ZNF286BP0CG31 522 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 SELPP16109 830 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 ATP2B1P20020 1258 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 SP2Q02086 613 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
VCP-206ENST00000480327 TNFRSF25Q93038 417 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
VCP-206ENST00000480327 BCAS3Q9H6U6 928 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 SUGCTQ9HAC7 445 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 C11orf16Q9NQ32 467 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 WDFY4Q6ZS81 3184 aa10.28□□□□□ -0.76
VCP-206ENST00000480327 MYO7AQ13402 2215 aa10.27□□□□□ -0.76
VCP-206ENST00000480327 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 FAM86B1E9PN63 330 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 GTPBP6O43824 516 aaPredicted RBP10.27□□□□□ -0.77
VCP-206ENST00000480327 EDIL3O43854 480 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 GJB5O95377 273 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 TDP2O95551 362 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 FAM86B2P0C5J1 330 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 ITGB5P18084 799 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 SYT1P21579 422 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 MFSD10Q14728 455 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 KIAA0753Q2KHM9 967 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 LETM2Q2VYF4 491 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 HSDL1Q3SXM5 330 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 ZNF618Q5T7W0 954 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.77
VCP-206ENST00000480327 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 XRRA1Q6P2D8 792 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 CNKSR3Q6P9H4 555 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.27□□□□□ -0.772e-6■■□□□ 13.9
VCP-206ENST00000480327 NLRX1Q86UT6 975 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 PLA2G4DQ86XP0 818 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 TEX2Q8IWB9 1127 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 FOXD4L4Q8WXT5 416 aaPredicted RBP10.27□□□□□ -0.77
VCP-206ENST00000480327 INPP4AQ96PE3 977 aaPredicted RBP10.27□□□□□ -0.77
VCP-206ENST00000480327 MXRA8Q9BRK3 442 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 COG5Q9UP83 839 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 TELO2Q9Y4R8 837 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 UBIAD1Q9Y5Z9 338 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 COL4A6Q14031 1691 aa10.27□□□□□ -0.77
VCP-206ENST00000480327 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 FIBPO43427 364 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 STAM2O75886 525 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 CYP3A4P08684 503 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 ARP10275 920 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 PDCP20941 246 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms