RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 C7orf31Q8N865 590 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 GTF2IRD1Q9UHL9 959 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 DCDC2CA8MYV0 355 aa22.22■■□□□ 1.15
LIME1-205ENST00000480139 TLR3O15455 904 aaKnown RBP22.22■■□□□ 1.15
LIME1-205ENST00000480139 PQBP1O60828 265 aaKnown RBP22.22■■□□□ 1.15
LIME1-205ENST00000480139 CD4P01730 458 aa22.22■■□□□ 1.15
LIME1-205ENST00000480139 TXKP42681 527 aa22.22■■□□□ 1.15
LIME1-205ENST00000480139 ATP2C1P98194 919 aaPredicted RBP22.22■■□□□ 1.15
LIME1-205ENST00000480139 SWSAP1Q6NVH7 229 aa22.22■■□□□ 1.15
LIME1-205ENST00000480139 TNPO1Q92973 898 aaKnown RBP22.22■■□□□ 1.15
LIME1-205ENST00000480139 FAM47CQ5HY64 1035 aa22.21■■□□□ 1.15
LIME1-205ENST00000480139 PDXDC2PQ6P474 469 aa22.21■■□□□ 1.15
LIME1-205ENST00000480139 DPF3Q92784 378 aa22.21■■□□□ 1.15
LIME1-205ENST00000480139 RNPEPQ9H4A4 650 aa22.21■■□□□ 1.15
LIME1-205ENST00000480139 HDAC6Q9UBN7 1215 aa22.21■■□□□ 1.15
LIME1-205ENST00000480139 GABBR1Q9UBS5 961 aa22.21■■□□□ 1.15
LIME1-205ENST00000480139 TNRC18O15417 2968 aaPredicted RBP22.2■■□□□ 1.15
LIME1-205ENST00000480139 EML1O00423 815 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 F13A1P00488 732 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 SMIM10L2AP0DMW4 78 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 SMIM10L2BP0DMW5 78 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 FXR2P51116 673 aaKnown RBP eCLIP22.2■■□□□ 1.14
LIME1-205ENST00000480139 CHMP4BP1P59074 171 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 PKP1Q13835 747 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 EPHA7Q15375 998 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 ATP6V0A1Q93050 837 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 CEP131Q9UPN4 1083 aa22.2■■□□□ 1.14
LIME1-205ENST00000480139 B4GALT4O60513 344 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 BRD1O95696 1058 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 CLTBP09497 229 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 MARK3P27448 753 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 FAAP100Q0VG06 881 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 PLCB4Q15147 1175 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 TMEM266Q2M3C6 531 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 ARL6IP4Q66PJ3 421 aaKnown RBP22.19■■□□□ 1.14
LIME1-205ENST00000480139 NCAPH2Q6IBW4 605 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 C7orf61Q8IZ16 206 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 NEK9Q8TD19 979 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 ATP8B4Q8TF62 1192 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 FAM167AQ96KS9 214 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 NR2E3Q9Y5X4 410 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 NRCAMQ92823 1304 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 KAT6AQ92794 2004 aa22.19■■□□□ 1.14
LIME1-205ENST00000480139 POTEB3A0JP26 581 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 C17orf102A2RUQ5 167 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 DKC1O60832 514 aaKnown RBP eCLIP22.18■■□□□ 1.14
LIME1-205ENST00000480139 P4HBP07237 508 aaKnown RBP22.18■■□□□ 1.14
LIME1-205ENST00000480139 GNAT1P11488 350 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 ATP4AP20648 1035 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 PDIA5Q14554 519 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 GDF6Q6KF10 455 aaPredicted RBP22.18■■□□□ 1.14
LIME1-205ENST00000480139 POTEBQ6S5H4 581 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 BBXQ8WY36 941 aaPredicted RBP22.18■■□□□ 1.14
LIME1-205ENST00000480139 RAB34Q9BZG1 259 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 TRPV6Q9H1D0 765 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 PDLIM7Q9NR12 457 aa22.18■■□□□ 1.14
LIME1-205ENST00000480139 TRMT13Q9NUP7 481 aaKnown RBP22.18■■□□□ 1.14
LIME1-205ENST00000480139 MORC2Q9Y6X9 1032 aaPredicted RBP22.18■■□□□ 1.14
LIME1-205ENST00000480139 COL1A2P08123 1366 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 ZNF862O60290 1169 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 HBP1O60381 514 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 DDIT3P35638 169 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 TECP42680 631 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 QARSP47897 775 aaKnown RBP22.17■■□□□ 1.14
LIME1-205ENST00000480139 PSMC5P62195 406 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 ADAM17P78536 824 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 PPFIA1Q13136 1202 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 SF3A1Q15459 793 aaKnown RBP22.17■■□□□ 1.14
LIME1-205ENST00000480139 PTGISQ16647 500 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 UGCGQ16739 394 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 FAM173BQ6P4H8 233 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 DTHD1Q6ZMT9 781 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 IGSF22Q8N9C0 903 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 PPP1R13LQ8WUF5 828 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 LMBR1Q8WVP7 490 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 TBX21Q9UL17 535 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 TRPC6Q9Y210 931 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 PDE4DIPQ5VU43 2346 aa22.17■■□□□ 1.14
LIME1-205ENST00000480139 LTBP2Q14767 1821 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 POTEMA6NI47 508 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 RRN3P2A6NIE6 340 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 KIAA0355O15063 1070 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 OATP04181 439 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 PRKCEQ02156 737 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 CTAGE1Q96RT6 745 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 HSD17B14Q9BPX1 270 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 EIF2AK1Q9BQI3 630 aaKnown RBP22.16■■□□□ 1.14
LIME1-205ENST00000480139 SETD4Q9NVD3 440 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 STK24Q9Y6E0 443 aa22.16■■□□□ 1.14
LIME1-205ENST00000480139 TRIP12Q14669 1992 aaPredicted RBP22.16■■□□□ 1.14
LIME1-205ENST00000480139 INSRRP14616 1297 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 HIC1Q14526 733 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 PTPAQ15257 358 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 GRIK4Q16099 956 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 XKR3Q5GH77 459 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 ZNF484Q5JVG2 852 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 ATL3Q6DD88 541 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 C4orf19Q8IY42 314 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 CKAP2LQ8IYA6 745 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 BANK1Q8NDB2 785 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms