RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 CUTAO60888 179 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ASGR1P07306 291 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CAPN2P17655 700 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CDC25AP30304 524 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 QARSP47897 775 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 GRIN1Q05586 938 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 PDXDC2PQ6P474 469 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CXCL17Q6UXB2 119 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 TPH2Q8IWU9 490 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 HSD17B14Q9BPX1 270 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 EIF2AK1Q9BQI3 630 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 RGL1Q9NZL6 768 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 GABBR1Q9UBS5 961 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ZNF215Q9UL58 517 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 MKI67P46013 3256 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 PP2D1A8MPX8 630 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 H3BRB1 525 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 DKC1O60832 514 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 LGR5O75473 907 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 SLITRK3O94933 977 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 LGALS2P05162 132 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ZNF286BP0CG31 522 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 TXLNAP40222 546 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CCT6AP40227 531 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 SLC26A2P50443 739 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ACLYP53396 1101 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 PSMC5P62195 406 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 PURAQ00577 322 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CYP4A11Q02928 519 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ADALQ6DHV7 355 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CLEC17AQ6ZS10 378 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 PLPPR4Q7Z2D5 763 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 TRIM50Q86XT4 487 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CCDC60Q8IWA6 550 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 CKAP2LQ8IYA6 745 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 BANK1Q8NDB2 785 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 SNX29Q8TEQ0 813 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 DYDC2Q96IM9 177 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 MTG1Q9BT17 334 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 TUT1Q9H6E5 874 aaKnown RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 ERAP1Q9NZ08 941 aa12.56□□□□□ -0.4
CLDN11-205ENST00000480067 MAFBQ9Y5Q3 323 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-205ENST00000480067 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 CABYRO75952 493 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 RPA1P27694 616 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 CTTNQ14247 550 aaKnown RBP12.55□□□□□ -0.4
CLDN11-205ENST00000480067 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
CLDN11-205ENST00000480067 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
CLDN11-205ENST00000480067 CABP7Q86V35 215 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 CATSPER3Q86XQ3 398 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 TNS4Q8IZW8 715 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 AFAP1L1Q8TED9 768 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
CLDN11-205ENST00000480067 ABHD8Q96I13 439 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 EPSTI1Q96J88 318 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 CDK5RAP3Q96JB5 506 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 GLT1D1Q96MS3 346 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 PCYT2Q99447 389 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 LXNQ9BS40 222 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 POLR3CQ9BUI4 534 aaPredicted RBP12.55□□□□□ -0.4
CLDN11-205ENST00000480067 KATNAL1Q9BW62 490 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 TUFT1Q9NNX1 390 aa12.55□□□□□ -0.4
CLDN11-205ENST00000480067 F2P00734 622 aa12.54□□□□□ -0.4
CLDN11-205ENST00000480067 MARK3P27448 753 aa12.54□□□□□ -0.4
CLDN11-205ENST00000480067 ANKLE1Q8NAG6 615 aa12.54□□□□□ -0.4
CLDN11-205ENST00000480067 CALML4Q96GE6 196 aa12.54□□□□□ -0.4
CLDN11-205ENST00000480067 NRBP2Q9NSY0 501 aa12.54□□□□□ -0.4
CLDN11-205ENST00000480067 FAM13BQ9NYF5 915 aa12.54□□□□□ -0.4
CLDN11-205ENST00000480067 MED24O75448 989 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 SPATA31C1P0DKV0 1188 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 CMA1P23946 247 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 MFSD10Q14728 455 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 UGCGQ16739 394 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 KIAA0753Q2KHM9 967 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 USP49Q70CQ1 688 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 C4orf19Q8IY42 314 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 KAT2BQ92831 832 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 NACC1Q96RE7 527 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 MMTAG2Q9BU76 263 aaKnown RBP12.53□□□□□ -0.4
CLDN11-205ENST00000480067 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 NT5C3AQ9H0P0 336 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 RNPEPQ9H4A4 650 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
CLDN11-205ENST00000480067 KIAA1024Q9UPX6 916 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms