RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 QARSP47897 775 aaKnown RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 KCNJ6P48051 423 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 GTF2A2P52657 109 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 PMS1P54277 932 aaKnown RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 CYP4A11Q02928 519 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 KCNJ12Q14500 433 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 STXBP2Q15833 593 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 SPECC1LQ69YQ0 1117 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 RINT1Q6NUQ1 792 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 C1orf186Q6ZWK4 172 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 TPH2Q8IWU9 490 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 C4orf19Q8IY42 314 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 CSGALNACT2Q8N6G5 542 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 C2orf69Q8N8R5 385 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 LXNQ9BS40 222 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 MOV10L1Q9BXT6 1211 aaKnown RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 BHMT2Q9H2M3 363 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 GBA2Q9HCG7 927 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-204ENST00000480057 MAPK8IP1Q9UQF2 711 aa12.23□□□□□ -0.45
VTI1A-204ENST00000480057 UBE4BO95155 1302 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 TRIM49BA6NDI0 452 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 TPM2P07951 284 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 KCNA2P16389 499 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 GJA5P36382 358 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 ALDH5A1P51649 535 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 ZNF131P52739 623 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 COPB1P53618 953 aaKnown RBP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 PSMC5P62195 406 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 TRIM14Q14142 442 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 KRT31Q15323 416 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 BMT2Q1RMZ1 405 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 ZCWPW2Q504Y3 356 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 HERC4Q5GLZ8 1057 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 MAP1SQ66K74 1059 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 ANKRD40Q6AI12 368 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 FILIP1Q7Z7B0 1213 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 ANKRD23Q86SG2 305 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 NCAPG2Q86XI2 1143 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 IRF2BP1Q8IU81 584 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 CCDC112Q8NEF3 446 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 KIAA1524Q8TCG1 905 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 CACTINQ8WUQ7 758 aaKnown RBP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 CEP63Q96MT8 703 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 REEP2Q9BRK0 252 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
VTI1A-204ENST00000480057 SEMA6BQ9H3T3 888 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 ANKEF1Q9NU02 776 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
VTI1A-204ENST00000480057 A0A1W2PQC6 194 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 ARHGEF35A5YM69 484 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 TRAF5O00463 557 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 EIF3DO15371 548 aaKnown RBP eCLIP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 GNA14O95837 355 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 MAPTP10636 758 aaKnown RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 ERCC3P19447 782 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 GCLCP48506 637 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 FKBP3Q00688 224 aaKnown RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 EDRF1Q3B7T1 1238 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 KCNV1Q6PIU1 500 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 STXBP4Q6ZWJ1 553 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 EPM2AIP1Q7L775 607 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 ZC3H3Q8IXZ2 948 aaKnown RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 ZNF830Q96NB3 372 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 PURBQ96QR8 312 aaKnown RBP12.21□□□□□ -0.45
VTI1A-204ENST00000480057 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 RRAGCQ9HB90 399 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 KCND1Q9NSA2 647 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 PCDHA10Q9Y5I2 948 aa12.21□□□□□ -0.45
VTI1A-204ENST00000480057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.21□□□□□ -0.455e-6■■■□□ 17
VTI1A-204ENST00000480057 LRRC37A2A6NM11 1700 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 DNAJC25-GNG10A0A024R161 153 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 LGALS16A8MUM7 142 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 DDX39AO00148 427 aaKnown RBP12.2□□□□□ -0.46
VTI1A-204ENST00000480057 N4BP3O15049 544 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 ATP9AO75110 1047 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 RGS20O76081 388 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 FAM13AO94988 1023 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 PSAPP07602 524 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 POTEJP0CG39 1038 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 TGFB3P10600 412 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-204ENST00000480057 DNM2P50570 870 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 CCNA1P78396 465 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 ALCAMQ13740 583 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 KCTD2Q14681 263 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 ZNF507Q8TCN5 953 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 MORC4Q8TE76 937 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 PIGOQ8TEQ8 1089 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 SCFD1Q8WVM8 642 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 ATP6V0A1Q93050 837 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 HPS3Q969F9 1004 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 IQCDQ96DY2 449 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms