RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 GLI3P10071 1580 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 HNRNPDLO14979 420 aaKnown RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 MAFGO15525 162 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 HOXA2O43364 376 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 ABL1P00519 1130 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 TNNI1P19237 187 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 ARID5AQ03989 594 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 C11orf57Q6ZUT1 292 aaPredicted RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 SAMD3Q8N6K7 520 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 VTA1Q9NP79 307 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 ERAP1Q9NZ08 941 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 ANKFY1Q9P2R3 1169 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 C17orf102A2RUQ5 167 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 KLRG2A4D1S0 409 aaPredicted RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 K7ENM7 598 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 STX10O60499 249 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 NMT2O60551 498 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 TLR2O60603 784 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 SLU7O95391 586 aaKnown RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 CYP2C9P11712 490 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 ARPP19P56211 112 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 SPATA1Q5VX52 437 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 CNNM4Q6P4Q7 775 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 FBXO46Q6PJ61 603 aaPredicted RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 NEK9Q8TD19 979 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 ERCC4Q92889 916 aaPredicted RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 GOLPH3LQ9H4A5 285 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 TRMT1Q9NXH9 659 aaKnown RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 TUBE1Q9UJT0 475 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 CALUO43852 315 aaPredicted RBP6.55□□□□□ -1.36
CPS1-207ENST00000479988 CYP2C19P33261 490 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 TECP42680 631 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 FAM193AP78312 1265 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 BIRC2Q13490 618 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 DPCR1Q3MIW9 517 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 C1orf228Q6PIY5 440 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 USP17L6PQ6QN14 398 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 GLB1LQ6UWU2 654 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 GOLGA5Q8TBA6 731 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 RNF34Q969K3 372 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 AIFM3Q96NN9 605 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 GAKO14976 1311 aa6.55□□□□□ -1.36
CPS1-207ENST00000479988 AKR1B15C9JRZ8 316 aaPredicted RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 RPS6KA5O75582 802 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 SMARCA1P28370 1054 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 CASQ1P31415 396 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 THPOP40225 353 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 HTRA3P83110 453 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 RAD51AP2Q09MP3 1159 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 CRHR2Q13324 411 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 PNOCQ13519 176 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 NTRK3Q16288 839 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 PFKFB3Q16875 520 aaPredicted RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 AXDND1Q5T1B0 1012 aaPredicted RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 SPECC1LQ69YQ0 1117 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 GPBP1Q86WP2 473 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 AGBL1Q96MI9 1066 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 KMT5AQ9NQR1 393 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 MAP3K20Q9NYL2 800 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 PCDHA10Q9Y5I2 948 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 CETN3O15182 167 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 USP2O75604 605 aaPredicted RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 TUBBP07437 444 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 CCDC175P0C221 793 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 SOX10P56693 466 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 RPS6P62753 249 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 PTGDRQ13258 359 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 ENOX2Q16206 610 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 MAPK6Q16659 721 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 TEX35Q5T0J7 233 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 SAPCD2Q86UD0 394 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 EHBP1Q8NDI1 1231 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 CLIC6Q96NY7 704 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 BAG1Q99933 345 aaPredicted RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 RIOK1Q9BRS2 568 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 UBE2OQ9C0C9 1292 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 C2orf40Q9H1Z8 148 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 CPVLQ9H3G5 476 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 MORC2Q9Y6X9 1032 aaPredicted RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 IPO5O00410 1097 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 ELNP15502 786 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 TDRD12Q587J7 1177 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 TTBK2Q6IQ55 1244 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 GPR142Q7Z601 462 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 CACTINQ8WUQ7 758 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 MED10Q9BTT4 135 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 MOV10L1Q9BXT6 1211 aaKnown RBP6.54□□□□□ -1.36
CPS1-207ENST00000479988 C5P01031 1676 aa6.54□□□□□ -1.36
CPS1-207ENST00000479988 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 K7ERI5 159 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 TRAPPC3O43617 180 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 ERLIN1O75477 346 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 PAK1Q13153 545 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 PAK2Q13177 524 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 CEP55Q53EZ4 464 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 IQCEQ6IPM2 695 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 SWSAP1Q6NVH7 229 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms