RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 AMNQ9BXJ7 453 aa27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 METTL14Q9HCE5 456 aaKnown RBP27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 FEZ2Q9UHY8 353 aaPredicted RBP27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 HDAC9Q9UKV0 1011 aa27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 A0A087X0T9 212 aa27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 FAM228BP0C875 321 aa27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 EEF2P13639 858 aaKnown RBP27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 KLRC1P26715 233 aa27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 KIAA0753Q2KHM9 967 aa27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 CATSPER3Q86XQ3 398 aa27.04■■□□□ 1.92
SYNGAP1-206ENST00000479510 SLC16A3O15427 465 aaKnown RBP27.03■■□□□ 1.92
SYNGAP1-206ENST00000479510 HSF2BPO75031 334 aa27.03■■□□□ 1.92
SYNGAP1-206ENST00000479510 AFPP02771 609 aaKnown RBP27.03■■□□□ 1.92
SYNGAP1-206ENST00000479510 CIITAP33076 1130 aa27.03■■□□□ 1.92
SYNGAP1-206ENST00000479510 PAK2Q13177 524 aa27.03■■□□□ 1.92
SYNGAP1-206ENST00000479510 EIF1ADQ8N9N8 165 aaKnown RBP27.03■■□□□ 1.92
SYNGAP1-206ENST00000479510 PSMB7Q99436 277 aa27.03■■□□□ 1.92
SYNGAP1-206ENST00000479510 POTEFA5A3E0 1075 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 POTEIP0CG38 1075 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 SREBF1P36956 1147 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 SCNN1DP51172 638 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 SLC7A5Q01650 507 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 DPY19L2P1Q6NXN4 242 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 POTEGQ6S5H5 508 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 POTEEQ6S8J3 1075 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 MREGQ8N565 214 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 FAM133AQ8N9E0 248 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 INPP4AQ96PE3 977 aaPredicted RBP27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 DNAJC18Q9H819 358 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 PI4KBQ9UBF8 816 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 KIF13BQ9NQT8 1826 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 NPR1P16066 1061 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 FKBP1AP62942 108 aaKnown RBP27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 HDLBPQ00341 1268 aaKnown RBP27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 CERKLQ49MI3 558 aaPredicted RBP27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 GMCL1P1Q8NEA9 526 aa27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.02■■□□□ 1.92
SYNGAP1-206ENST00000479510 RPL13P26373 211 aaKnown RBP27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 STAT3P40763 770 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 PRKCIP41743 596 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 CRKP46108 304 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 NFIAQ12857 509 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 IRF2BP2Q7Z5L9 587 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 GMCL1Q96IK5 515 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 RUFY1Q96T51 708 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 IDI2Q9BXS1 227 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 ADAMTS1Q9UHI8 967 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 SPATA31C1P0DKV0 1188 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 TATDN1Q6P1N9 297 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 LENG9Q96B70 501 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 ZBTB9Q96C00 473 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 POLR3CQ9BUI4 534 aaPredicted RBP27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 TYW1Q9NV66 732 aaKnown RBP27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 SMARCAL1Q9NZC9 954 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 EHD2Q9NZN4 543 aa27.01■■□□□ 1.91
SYNGAP1-206ENST00000479510 CACNB1Q02641 598 aaPredicted RBP27■■□□□ 1.91
SYNGAP1-206ENST00000479510 PRR16Q569H4 304 aa27■■□□□ 1.91
SYNGAP1-206ENST00000479510 TMEM179Q6ZVK1 233 aa27■■□□□ 1.91
SYNGAP1-206ENST00000479510 MS4A14Q96JA4 679 aa27■■□□□ 1.91
SYNGAP1-206ENST00000479510 RASSF4Q9H2L5 321 aa27■■□□□ 1.91
SYNGAP1-206ENST00000479510 GTPBP10A4D1E9 387 aaKnown RBP26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 XRCC5P13010 732 aaKnown RBP26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 UCHL3P15374 230 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 ALDH1B1P30837 517 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 TNNC1P63316 161 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 EXOC3L4Q17RC7 722 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 PODNQ7Z5L7 613 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 TAF4BQ92750 862 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 PBKQ96KB5 322 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 REEP2Q9BRK0 252 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 ZHX3Q9H4I2 956 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 SPDYE3A6NKU9 549 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 FBXO11Q86XK2 927 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 SFR1Q86XK3 245 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 GPIHBP1Q8IV16 184 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 SPAG5Q96R06 1193 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 TMEM59LQ9UK28 342 aa26.99■■□□□ 1.91
SYNGAP1-206ENST00000479510 FTCDO95954 541 aa26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 CYP3A4P08684 503 aa26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 GAP43P17677 238 aa26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 SKOR1P84550 965 aa26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 C1orf131Q8NDD1 294 aaKnown RBP26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 WHAMMQ8TF30 809 aa26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 TMX4Q9H1E5 349 aaPredicted RBP26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 INTUQ9ULD6 942 aa26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 SIPA1L1O43166 1804 aa26.98■■□□□ 1.91
SYNGAP1-206ENST00000479510 G3V3G9 751 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 PON1P27169 355 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 HOXD13P35453 343 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 CASP5P51878 434 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 PTK2Q05397 1052 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 DOK7Q18PE1 504 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 DCAF8Q5TAQ9 597 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 FAM107BQ9H098 131 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 LCMT1Q9UIC8 334 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 SYNPO2Q9UMS6 1093 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 ANKRD31Q8N7Z5 1873 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 HEXIM1O94992 359 aaKnown RBP26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 GLI1P08151 1106 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms