RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-211ENST00000479100 C7orf31Q8N865 590 aa17.14■□□□□ 0.33
COL16A1-211ENST00000479100 SMARCAD1Q9H4L7 1026 aa17.14■□□□□ 0.33
COL16A1-211ENST00000479100 ZSCAN16Q9H4T2 348 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-211ENST00000479100 DISC1Q9NRI5 854 aa17.14■□□□□ 0.33
COL16A1-211ENST00000479100 PRKAG2Q9UGJ0 569 aa17.14■□□□□ 0.33
COL16A1-211ENST00000479100 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
COL16A1-211ENST00000479100 CDH23Q9H251 3354 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 LGR5O75473 907 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 ATG7O95352 703 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-211ENST00000479100 PDIA4P13667 645 aaKnown RBP17.13■□□□□ 0.33
COL16A1-211ENST00000479100 STAT5BP51692 787 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 JAK3P52333 1124 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 PTGDRQ13258 359 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 PDXDC2PQ6P474 469 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 Q7L0L9 218 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 DEFB123Q8N688 67 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 MTMR9Q96QG7 549 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 PCYT2Q99447 389 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-211ENST00000479100 ZNF302Q9NR11 478 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.13■□□□□ 0.33
COL16A1-211ENST00000479100 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 VAV3Q9UKW4 847 aa17.13■□□□□ 0.33
COL16A1-211ENST00000479100 A0A0C4DFX4 3053 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 HAS3O00219 553 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 SFNP31947 248 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 CDK7P50613 346 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 PKP1Q13835 747 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 FOXD4L6Q3SYB3 417 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-211ENST00000479100 FOXD4L3Q6VB84 417 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-211ENST00000479100 TRMT1LQ7Z2T5 733 aaKnown RBP17.12■□□□□ 0.33
COL16A1-211ENST00000479100 CCDC60Q8IWA6 550 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-211ENST00000479100 CKAP2LQ8IYA6 745 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 BADQ92934 168 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 PRDM5Q9NQX1 630 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-211ENST00000479100 MTMR10Q9NXD2 777 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 HDAC6Q9UBN7 1215 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 EMSYQ7Z589 1322 aa17.12■□□□□ 0.33
COL16A1-211ENST00000479100 EML1O00423 815 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 KIAA0355O15063 1070 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 TLR3O15455 904 aaKnown RBP17.11■□□□□ 0.33
COL16A1-211ENST00000479100 TECP42680 631 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
COL16A1-211ENST00000479100 PPP2R5CQ13362 524 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 SHHQ15465 462 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 C9orf50Q5SZB4 431 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 RDM1Q8NG50 284 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 TOX2Q96NM4 488 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 SEZ6LQ9BYH1 1024 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 TRPV6Q9H1D0 765 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 TRPC6Q9Y210 931 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 NOD1Q9Y239 953 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 MROH7Q68CQ1 1323 aa17.11■□□□□ 0.33
COL16A1-211ENST00000479100 IGKV6D-21A0A0A0MT36 114 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 F13A1P00488 732 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 CLTBP09497 229 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 SMIM10L2AP0DMW4 78 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 SMIM10L2BP0DMW5 78 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-211ENST00000479100 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 PLPPR4Q7Z2D5 763 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 TRMT13Q9NUP7 481 aaKnown RBP17.1■□□□□ 0.33
COL16A1-211ENST00000479100 CEP131Q9UPN4 1083 aa17.1■□□□□ 0.33
COL16A1-211ENST00000479100 POTEB3A0JP26 581 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 POTEMA6NI47 508 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 LAD1O00515 517 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 B4GALT4O60513 344 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 IGBP1P78318 339 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-211ENST00000479100 FAAP100Q0VG06 881 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 PPFIA1Q13136 1202 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 EPHA7Q15375 998 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
COL16A1-211ENST00000479100 UGCGQ16739 394 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 GDF6Q6KF10 455 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-211ENST00000479100 POTEBQ6S5H4 581 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 BANK1Q8NDB2 785 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL16A1-211ENST00000479100 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 CLIC4Q9Y696 253 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 SCN10AQ9Y5Y9 1956 aa17.09■□□□□ 0.33
COL16A1-211ENST00000479100 BMP15O95972 392 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 SLC26A2P50443 739 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 EPHB4P54760 987 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms