RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PUS3Q9BZE2 481 aaKnown RBP23.1■■□□□ 1.29
SDF4-206ENST00000478938 SCOCQ9UIL1 159 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 SPEF2Q9C093 1822 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 KLRC4O43908 158 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 BAG3O95817 575 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 GSTT1P30711 240 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 IL15P40933 162 aaPredicted RBP23.1■■□□□ 1.29
SDF4-206ENST00000478938 PSMC4P43686 418 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 ANKRD13DQ6ZTN6 518 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 CCNJLQ8IV13 435 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
SDF4-206ENST00000478938 BAP1Q92560 729 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 PLIN2Q99541 437 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 PACSIN1Q9BY11 444 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 RXFP1Q9HBX9 757 aa23.1■■□□□ 1.29
SDF4-206ENST00000478938 DMAP1Q9NPF5 467 aaPredicted RBP23.1■■□□□ 1.29
SDF4-206ENST00000478938 E7ENQ6 273 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 RGS16O15492 202 aaPredicted RBP23.09■■□□□ 1.29
SDF4-206ENST00000478938 SERPINB4P48594 390 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 ATXN10Q9UBB4 475 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 BMP15O95972 392 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 CCNB1P14635 433 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 RPS6KA1Q15418 735 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 UBAP2Q5T6F2 1119 aaKnown RBP23.09■■□□□ 1.29
SDF4-206ENST00000478938 HGSNATQ68CP4 663 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 IRGCQ6NXR0 463 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.09■■□□□ 1.299e-7■■■■■ 51.2
SDF4-206ENST00000478938 ANKLE1Q8NAG6 615 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 UHMK1Q8TAS1 419 aaKnown RBP23.09■■□□□ 1.29
SDF4-206ENST00000478938 P2RX5Q93086 422 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 RAB3IPQ96QF0 476 aaPredicted RBP23.09■■□□□ 1.29
SDF4-206ENST00000478938 TRIM51Q9BSJ1 452 aa23.09■■□□□ 1.29
SDF4-206ENST00000478938 MCM7P33993 719 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 FOXO4P98177 505 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 CNGA2Q16280 664 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 AMOTQ4VCS5 1084 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 GIMAP8Q8ND71 665 aaPredicted RBP23.08■■□□□ 1.29
SDF4-206ENST00000478938 NOC2LQ9Y3T9 749 aaKnown RBP23.08■■□□□ 1.29
SDF4-206ENST00000478938 DIP2AQ14689 1571 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 SLCO1A2P46721 670 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 CASP7P55210 303 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 TTC8Q8TAM2 541 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 TBC1D16Q8TBP0 767 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 PGM2Q96G03 612 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 FMO2Q99518 471 aa23.08■■□□□ 1.29
SDF4-206ENST00000478938 PIK3C2AO00443 1686 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 KRIT1O00522 736 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 PDXDC1Q6P996 788 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 DYDC1Q8WWB3 177 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 YIPF2Q9BWQ6 316 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 TXLNGYQ9BZA5 131 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 ARL2BPQ9Y2Y0 163 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 GJB6O95452 261 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 OATP04181 439 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 SESN3P58005 492 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 RCN2Q14257 317 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 FAM114A1Q8IWE2 563 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.07■■□□□ 1.28
SDF4-206ENST00000478938 TMEM237Q96Q45 408 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 PHF20Q9BVI0 1012 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 TRIM7Q9C029 511 aa23.07■■□□□ 1.28
SDF4-206ENST00000478938 EYA2O00167 538 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 BCL9O00512 1426 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 UNC5CO95185 931 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 KCNA3P22001 575 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 CACNA2D1P54289 1103 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 FAM13CQ8NE31 585 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 PHACTR1Q9C0D0 580 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 NMRK1Q9NWW6 199 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.06■■□□□ 1.28
SDF4-206ENST00000478938 MGAT5Q09328 741 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 ZC2HC1CQ53FD0 456 aaPredicted RBP23.06■■□□□ 1.28
SDF4-206ENST00000478938 NAALADL2Q58DX5 795 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 BICDL1Q6ZP65 573 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
SDF4-206ENST00000478938 RNF25Q96BH1 459 aaPredicted RBP23.06■■□□□ 1.28
SDF4-206ENST00000478938 MLXIPLQ9NP71 852 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 NLRC4Q9NPP4 1024 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 ZNF510Q9Y2H8 683 aa23.06■■□□□ 1.28
SDF4-206ENST00000478938 PGRMC1O00264 195 aaKnown RBP23.05■■□□□ 1.28
SDF4-206ENST00000478938 CCNE1P24864 410 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 INHBCP55103 352 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 MIGA2Q7L4E1 593 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 LCA5Q86VQ0 697 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 EPS8L3Q8TE67 593 aaKnown RBP23.05■■□□□ 1.28
SDF4-206ENST00000478938 DHTKD1Q96HY7 919 aaPredicted RBP23.05■■□□□ 1.28
SDF4-206ENST00000478938 RHBDL2Q9NX52 303 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 SPATA31A3Q5VYP0 1347 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 LAMB4A4D0S4 1761 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 PP2D1A8MPX8 630 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 RBAK-RBAKDNI3L0D1 243 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 RHOBTB3O94955 611 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 VWA3BQ502W6 1294 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 ATP8B4Q8TF62 1192 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 ZNF333Q96JL9 665 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 PYM1Q9BRP8 204 aaKnown RBP23.05■■□□□ 1.28
SDF4-206ENST00000478938 ZMYND12Q9H0C1 365 aa23.05■■□□□ 1.28
SDF4-206ENST00000478938 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
SDF4-206ENST00000478938 NVLO15381 856 aaKnown RBP23.04■■□□□ 1.28
SDF4-206ENST00000478938 MCL1Q07820 350 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms