RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
VPS52-217ENST00000478934 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
VPS52-217ENST00000478934 ESYT3A0FGR9 886 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 ANO9A1A5B4 782 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 VGLL3A8MV65 326 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 KLRC1P26715 233 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 USP11P51784 963 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 CTTNQ14247 550 aaKnown RBP11.9□□□□□ -0.5
VPS52-217ENST00000478934 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
VPS52-217ENST00000478934 TATDN1Q6P1N9 297 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 SND1Q7KZF4 910 aaKnown RBP eCLIP11.9□□□□□ -0.5
VPS52-217ENST00000478934 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
VPS52-217ENST00000478934 FAM71BQ8TC56 605 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 MASTLQ96GX5 879 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 NYAP2Q9P242 653 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 CYP3A7-CYP3A51PA0A087WV96 503 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 CLRN2A0PK11 232 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 AGPSO00116 658 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 PALMO75781 387 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 CYP3A7P24462 503 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 GOLGA5Q8TBA6 731 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 TSGA10Q9BZW7 698 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 RBM12Q9NTZ6 932 aaKnown RBP11.9□□□□□ -0.5
VPS52-217ENST00000478934 TMEM51Q9NW97 253 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 RSPH14Q9UHP6 348 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 SCN9AQ15858 1988 aa11.9□□□□□ -0.5
VPS52-217ENST00000478934 TULP2O00295 520 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 AKAP3O75969 853 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 APBA3O96018 575 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 CKAP4Q07065 602 aaKnown RBP11.9□□□□□ -0.51
VPS52-217ENST00000478934 TRADDQ15628 312 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 DCAF17Q5H9S7 520 aaPredicted RBP11.9□□□□□ -0.51
VPS52-217ENST00000478934 SYDE2Q5VT97 1194 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 CCDC174Q6PII3 467 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 LRRC31Q6UY01 552 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 TMX4Q9H1E5 349 aaPredicted RBP11.9□□□□□ -0.51
VPS52-217ENST00000478934 CEP72Q9P209 647 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 BCS1LQ9Y276 419 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 MYO3BQ8WXR4 1341 aa11.9□□□□□ -0.51
VPS52-217ENST00000478934 SIPA1L1O43166 1804 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 SPDYE3A6NKU9 549 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 PDE6BP35913 854 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 SLC9C1Q4G0N8 1177 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 ZC2HC1CQ53FD0 456 aaPredicted RBP11.89□□□□□ -0.51
VPS52-217ENST00000478934 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 MBOAT7Q96N66 472 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 GANQ9H2C0 597 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 HDAC9Q9UKV0 1011 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 DNM3Q9UQ16 869 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 ABCB11O95342 1321 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 MYO1CO00159 1063 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 CFBP00751 764 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 ZNF76P36508 570 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 PTK2Q05397 1052 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 COG2Q14746 738 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 CCDC181Q5TID7 509 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 TCERG1LQ5VWI1 586 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 IDI2Q9BXS1 227 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 PSD3Q9NYI0 1048 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 FEZ2Q9UHY8 353 aaPredicted RBP11.89□□□□□ -0.51
VPS52-217ENST00000478934 VAV3Q9UKW4 847 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
VPS52-217ENST00000478934 FRMD3A2A2Y4 597 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 YDJCA8MPS7 323 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 PJA2O43164 708 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 SERPING1P05155 500 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 BMP3P12645 472 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 NMT1P30419 496 aaKnown RBP11.88□□□□□ -0.51
VPS52-217ENST00000478934 EPS15P42566 896 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 TUBB4BP68371 445 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 KLHL30Q0D2K2 578 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 KIAA0753Q2KHM9 967 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 TMEM179Q6ZVK1 233 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 TPH2Q8IWU9 490 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
VPS52-217ENST00000478934 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
VPS52-217ENST00000478934 EIF2AK1Q9BQI3 630 aaKnown RBP11.88□□□□□ -0.51
VPS52-217ENST00000478934 WDR18Q9BV38 432 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 CETN3O15182 167 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 GCNT3O95395 438 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 RPA1P27694 616 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 HAUS3Q68CZ6 603 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 ZNF571Q7Z3V5 609 aaPredicted RBP11.88□□□□□ -0.51
VPS52-217ENST00000478934 SLFN12Q8IYM2 578 aa11.88□□□□□ -0.51
VPS52-217ENST00000478934 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms