RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 H3BQ06 376 aaPredicted RBP15.16■□□□□ 0.02
VCL-205ENST00000478896 MAFGO15525 162 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 CSPG5O95196 566 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 RPLP2P05387 115 aaKnown RBP15.16■□□□□ 0.02
VCL-205ENST00000478896 NAPAP54920 295 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 LPIN1Q14693 890 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 PUS10Q3MIT2 529 aaKnown RBP15.16■□□□□ 0.02
VCL-205ENST00000478896 RNF20Q5VTR2 975 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 TSHZ1Q6ZSZ6 1077 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 FAM178BQ8IXR5 827 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 GJD3Q8N144 294 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 KHSRPQ92945 711 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■■□□ 16.1
VCL-205ENST00000478896 TNPO1Q92973 898 aaKnown RBP15.16■□□□□ 0.02
VCL-205ENST00000478896 SDF4Q9BRK5 362 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 C11orf84Q9BUA3 381 aaPredicted RBP15.16■□□□□ 0.02
VCL-205ENST00000478896 SLC9A2Q9UBY0 812 aa15.16■□□□□ 0.02
VCL-205ENST00000478896 TRANK1O15050 2925 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 MBLAC1A4D2B0 266 aaPredicted RBP15.15■□□□□ 0.02
VCL-205ENST00000478896 RRN3P2A6NIE6 340 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 MRPS6P82932 125 aaKnown RBP15.15■□□□□ 0.02
VCL-205ENST00000478896 COL9A3Q14050 684 aaPredicted RBP15.15■□□□□ 0.02
VCL-205ENST00000478896 BTG3Q14201 252 aaPredicted RBP15.15■□□□□ 0.02
VCL-205ENST00000478896 FBXO47Q5MNV8 452 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 PABPC5Q96DU9 382 aaKnown RBP15.15■□□□□ 0.02
VCL-205ENST00000478896 PGBD1Q96JS3 809 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 CD320Q9NPF0 282 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 RBM28Q9NW13 759 aaKnown RBP15.15■□□□□ 0.02
VCL-205ENST00000478896 CLDND1Q9NY35 253 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 FAM50BQ9Y247 325 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 LOXHD1Q8IVV2 1947 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 CNTNAP5Q8WYK1 1306 aa15.15■□□□□ 0.02
VCL-205ENST00000478896 RB1P06400 928 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 INSRRP14616 1297 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 IER5Q5VY09 327 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 WWC2Q6AWC2 1192 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 SGMS1Q86VZ5 419 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 NEK9Q8TD19 979 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 ZBTB10Q96DT7 871 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 MXRA8Q9BRK3 442 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 KCNH7Q9NS40 1196 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 TRPV2Q9Y5S1 764 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 TTC3P53804 2025 aa15.14■□□□□ 0.01
VCL-205ENST00000478896 KIAA1671Q9BY89 1806 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 GRXCR2A6NFK2 248 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 C5orf67F2Z3F1 127 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 PI4K2BG5E9Z4 385 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 ENPP3O14638 875 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 GPR37L1O60883 481 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 CD52P31358 61 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 BMPR1AP36894 532 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 ADCY7P51828 1080 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 TMEM62Q0P6H9 643 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 RTN1Q16799 776 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 MARCH8Q5T0T0 291 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 PPP1R18Q6NYC8 613 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 APOA5Q6Q788 366 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 NEK1Q96PY6 1258 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 ANO3Q9BYT9 981 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 LMAN2LQ9H0V9 348 aa15.13■□□□□ 0.01
VCL-205ENST00000478896 DDX39AO00148 427 aaKnown RBP15.12■□□□□ 0.01
VCL-205ENST00000478896 IBSPP21815 317 aaPredicted RBP15.12■□□□□ 0.01
VCL-205ENST00000478896 ZNF76P36508 570 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 STAT5BP51692 787 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 ACTR2P61160 394 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 PAK2Q13177 524 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 TRAPPC12Q8WVT3 735 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 TCEANC2Q96MN5 208 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 PCYT2Q99447 389 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 FTHL17Q9BXU8 183 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 AGO3Q9H9G7 860 aaKnown RBP15.12■□□□□ 0.01
VCL-205ENST00000478896 RC3H2Q9HBD1 1191 aaKnown RBP15.12■□□□□ 0.01
VCL-205ENST00000478896 RIC8AQ9NPQ8 531 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 C11orf16Q9NQ32 467 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 NAP1L2Q9ULW6 460 aaPredicted RBP15.12■□□□□ 0.01
VCL-205ENST00000478896 NFASCO94856 1347 aa15.12■□□□□ 0.01
VCL-205ENST00000478896 POTEB3A0JP26 581 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 GOLGA8AA7E2F4 631 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 GOLGA8BA8MQT2 603 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 hCG_1984214I3L0E3 225 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 GRM6O15303 877 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 ZBTB43O43298 467 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 NCK2O43639 380 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 DGKIO75912 1065 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 FOSP01100 380 aaPredicted RBP15.11■□□□□ 0.01
VCL-205ENST00000478896 AP3B2Q13367 1082 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 PLCB4Q15147 1175 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 CEP55Q53EZ4 464 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 TYW1BQ6NUM6 668 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 POTEBQ6S5H4 581 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 ZNF713Q8N859 430 aaPredicted RBP15.11■□□□□ 0.01
VCL-205ENST00000478896 CYP2W1Q8TAV3 490 aa15.11■□□□□ 0.01
VCL-205ENST00000478896 CLP1Q92989 425 aaKnown RBP15.11■□□□□ 0.01
VCL-205ENST00000478896 ZNF689Q96CS4 500 aaPredicted RBP15.11■□□□□ 0.01
VCL-205ENST00000478896 SMCO2A6NFE2 343 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 BACH1O14867 736 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 MMP1P03956 469 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 LINC00271P0C7V0 271 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 STAG3L1P0CL83 205 aa15.1■□□□□ 0.01
VCL-205ENST00000478896 ARP10275 920 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms