RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 H2AFYO75367 372 aaKnown RBP6.71□□□□□ -1.34
UPF3B-203ENST00000478840 GBX1Q14549 363 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 MSMPQ1L6U9 139 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 CPZQ66K79 652 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 GALNT18Q6P9A2 607 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 EP400NLQ6ZTU2 488 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 AMOTL1Q8IY63 956 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 ANKS4BQ8N8V4 417 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 PHOSPHO1Q8TCT1 267 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 SMOC1Q9H4F8 434 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 CCM2LQ9NUG4 571 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-203ENST00000478840 FBLN5Q9UBX5 448 aa6.71□□□□□ -1.34
UPF3B-203ENST00000478840 KDM1AO60341 852 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 ZRANB2O95218 330 aaKnown RBP eCLIP6.7□□□□□ -1.34
UPF3B-203ENST00000478840 C4BPAP04003 597 aaKnown RBP6.7□□□□□ -1.34
UPF3B-203ENST00000478840 TRIM27P14373 513 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 MVKQ03426 396 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 CHRNEQ04844 493 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 NKAPLQ5M9Q1 402 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 STEAP3Q658P3 488 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 NME9Q86XW9 330 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 STK11IPQ8N1F8 1099 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 USP33Q8TEY7 942 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 CLIP3Q96DZ5 547 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 CD244Q9BZW8 370 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 ADAMTS10Q9H324 1103 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 MS4A5Q9H3V2 200 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 CARS2Q9HA77 564 aaKnown RBP6.7□□□□□ -1.34
UPF3B-203ENST00000478840 SP110Q9HB58 689 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 RC3H2Q9HBD1 1191 aaKnown RBP6.7□□□□□ -1.34
UPF3B-203ENST00000478840 ZNF277Q9NRM2 450 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-203ENST00000478840 IMPACTQ9P2X3 320 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 ZBTB21Q9ULJ3 1066 aa6.7□□□□□ -1.34
UPF3B-203ENST00000478840 NOTOA8MTQ0 251 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 HGSO14964 777 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-203ENST00000478840 NRDCO43847 1150 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 ADAM23O75077 832 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 USP2O75604 605 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-203ENST00000478840 MSL3P1P0C860 447 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 AKAP5P24588 427 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 ITGB7P26010 798 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 HTRA3P83110 453 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 ADCY1Q08828 1119 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 FSCN1Q16658 493 aaKnown RBP6.69□□□□□ -1.34
UPF3B-203ENST00000478840 CATSPEREQ5SY80 951 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 EFCAB2Q5VUJ9 269 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 CEP128Q6ZU80 1094 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-203ENST00000478840 SVIPQ8NHG7 77 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 ZNF496Q96IT1 587 aaPredicted RBP6.69□□□□□ -1.34
UPF3B-203ENST00000478840 TEKT5Q96M29 485 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 ANLNQ9NQW6 1124 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 CHST12Q9NRB3 414 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 TMEM59LQ9UK28 342 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 TELO2Q9Y4R8 837 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 TAF6LQ9Y6J9 622 aa6.69□□□□□ -1.34
UPF3B-203ENST00000478840 FAM90A27PA6NNH2 459 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 BUB1BO60566 1050 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-203ENST00000478840 NTRK1P04629 796 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 ASGR2P07307 311 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 GLI4P10075 376 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 PTPN1P18031 435 aaKnown RBP6.68□□□□□ -1.34
UPF3B-203ENST00000478840 ENPP1P22413 925 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 HOXA10P31260 410 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-203ENST00000478840 MTNR1BP49286 362 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 IKZF1Q13422 519 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 NR0B2Q15466 257 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 RALGPS1Q5JS13 557 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 RRP12Q5JTH9 1297 aaKnown RBP6.68□□□□□ -1.34
UPF3B-203ENST00000478840 SYCP2LQ5T4T6 812 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 SLC4A10Q6U841 1118 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 SPPL2CQ8IUH8 684 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 NETO2Q8NC67 525 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 PDZD8Q8NEN9 1154 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 JADE3Q92613 823 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 RUNDC1Q96C34 613 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 ALPK1Q96QP1 1244 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 SARGQ9BW04 601 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 SEMA6BQ9H3T3 888 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 ASH2LQ9UBL3 628 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 RCAN3Q9UKA8 241 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 INVSQ9Y283 1065 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 COMMD10Q9Y6G5 202 aa6.68□□□□□ -1.34
UPF3B-203ENST00000478840 RASSF10A6NK89 507 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 SLC27A2O14975 620 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 XPOTO43592 962 aaKnown RBP6.67□□□□□ -1.34
UPF3B-203ENST00000478840 IL33O95760 270 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 AGXTP21549 392 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 HERVK_113P62684 666 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 TUSC3Q13454 348 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 TMEM132BQ14DG7 1078 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 VPS72Q15906 364 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 RSPO4Q2I0M5 234 aaPredicted RBP6.67□□□□□ -1.34
UPF3B-203ENST00000478840 CYB5RLQ6IPT4 315 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 B3GNT9Q6UX72 402 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 KSR2Q6VAB6 950 aa6.67□□□□□ -1.34
UPF3B-203ENST00000478840 CXorf67Q86X51 503 aaPredicted RBP6.67□□□□□ -1.34
UPF3B-203ENST00000478840 DCP2Q8IU60 420 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms