RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 MARCH8Q5T0T0 291 aa26.05■■□□□ 1.76
C9orf3-216ENST00000478603 TEX2Q8IWB9 1127 aa26.05■■□□□ 1.76
C9orf3-216ENST00000478603 TGS1Q96RS0 853 aaKnown RBP26.05■■□□□ 1.76
C9orf3-216ENST00000478603 AGO4Q9HCK5 861 aaKnown RBP26.05■■□□□ 1.76
C9orf3-216ENST00000478603 INSL6Q9Y581 213 aa26.05■■□□□ 1.76
C9orf3-216ENST00000478603 NFASCO94856 1347 aa26.05■■□□□ 1.76
C9orf3-216ENST00000478603 CCDC196A0A1B0GTZ2 297 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.04■■□□□ 1.76
C9orf3-216ENST00000478603 PPFIA3O75145 1194 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 RPS6KB1P23443 525 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 ACTR2P61160 394 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 ERVK-21P61565 698 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 TAF2Q6P1X5 1199 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 DNAJB3Q8WWF6 145 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 IFIH1Q9BYX4 1025 aaKnown RBP26.04■■□□□ 1.76
C9orf3-216ENST00000478603 GLT8D2Q9H1C3 349 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 SUGCTQ9HAC7 445 aa26.04■■□□□ 1.76
C9orf3-216ENST00000478603 MBLAC1A4D2B0 266 aaPredicted RBP26.03■■□□□ 1.76
C9orf3-216ENST00000478603 MEIS1O00470 390 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 UPP2O95045 317 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 GHRP10912 638 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 INSRRP14616 1297 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 ZNF76P36508 570 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 HTRA4P83105 476 aaPredicted RBP26.03■■□□□ 1.76
C9orf3-216ENST00000478603 PKN1Q16512 942 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 RPAINQ86UA6 219 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 PHKBQ93100 1093 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 AZI2Q9H6S1 392 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 LOXHD1Q8IVV2 1947 aa26.03■■□□□ 1.76
C9orf3-216ENST00000478603 DDX39AO00148 427 aaKnown RBP26.02■■□□□ 1.76
C9orf3-216ENST00000478603 REC8O95072 547 aa26.02■■□□□ 1.76
C9orf3-216ENST00000478603 MGAT3Q09327 533 aa26.02■■□□□ 1.76
C9orf3-216ENST00000478603 TOP1MTQ969P6 601 aa26.02■■□□□ 1.76
C9orf3-216ENST00000478603 UIMC1Q96RL1 719 aa26.02■■□□□ 1.76
C9orf3-216ENST00000478603 C17orf80Q9BSJ5 609 aa26.02■■□□□ 1.76
C9orf3-216ENST00000478603 TRPC6Q9Y210 931 aa26.02■■□□□ 1.76
C9orf3-216ENST00000478603 NID2Q14112 1375 aa26.02■■□□□ 1.76
C9orf3-216ENST00000478603 FAM86B1E9PN63 330 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 FAM86B2P0C5J1 330 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 PLCB4Q15147 1175 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 RSPH3Q86UC2 560 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 ADAMTS19Q8TE59 1207 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 TRAPPC12Q8WVT3 735 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 APBB2Q92870 758 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 AGXT2Q9BYV1 514 aa26.01■■□□□ 1.75
C9orf3-216ENST00000478603 FAM49AQ9H0Q0 323 aaPredicted RBP26.01■■□□□ 1.75
C9orf3-216ENST00000478603 NLRC5Q86WI3 1866 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 PRPF3O43395 683 aaKnown RBP26■■□□□ 1.75
C9orf3-216ENST00000478603 CCNE2O96020 404 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 STAT5BP51692 787 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 LPIN1Q14693 890 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 PLA2G4DQ86XP0 818 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 FBXL16Q8N461 479 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 SP7Q8TDD2 431 aaPredicted RBP26■■□□□ 1.75
C9orf3-216ENST00000478603 YME1L1Q96TA2 773 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 ZMYND12Q9H0C1 365 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 CDY2AQ9Y6F7 541 aa26■■□□□ 1.75
C9orf3-216ENST00000478603 ESYT2A0FGR8 921 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 RRN3P2A6NIE6 340 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 PSMA5P28066 241 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 KCNQ1P51787 676 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 NIPA1Q7RTP0 329 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 PLPPR4Q7Z2D5 763 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 IL27Q8NEV9 243 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 CRYGNQ8WXF5 182 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 C6orf50Q9HD87 102 aa25.99■■□□□ 1.75
C9orf3-216ENST00000478603 IGLV3-22A0A075B6J6 115 aa25.98■■□□□ 1.75
C9orf3-216ENST00000478603 ATG7O95352 703 aa25.98■■□□□ 1.75
C9orf3-216ENST00000478603 CCT2P78371 535 aaKnown RBP25.98■■□□□ 1.75
C9orf3-216ENST00000478603 NTRK3Q16288 839 aa25.98■■□□□ 1.75
C9orf3-216ENST00000478603 FBXO47Q5MNV8 452 aa25.98■■□□□ 1.75
C9orf3-216ENST00000478603 REXO1Q8N1G1 1221 aaKnown RBP25.98■■□□□ 1.75
C9orf3-216ENST00000478603 FBXO22Q8NEZ5 403 aa25.98■■□□□ 1.75
C9orf3-216ENST00000478603 RASGRP4Q8TDF6 673 aa25.98■■□□□ 1.75
C9orf3-216ENST00000478603 NCOA5Q9HCD5 579 aaKnown RBP25.98■■□□□ 1.75
C9orf3-216ENST00000478603 BRWD1Q9NSI6 2320 aa25.98■■□□□ 1.75
C9orf3-216ENST00000478603 TNFRSF10AO00220 468 aa25.97■■□□□ 1.75
C9orf3-216ENST00000478603 CYP3A4P08684 503 aa25.97■■□□□ 1.75
C9orf3-216ENST00000478603 PDIA3P30101 505 aaKnown RBP25.97■■□□□ 1.75
C9orf3-216ENST00000478603 MRPS6P82932 125 aaKnown RBP25.97■■□□□ 1.75
C9orf3-216ENST00000478603 AKAP17AQ02040 695 aaKnown RBP25.97■■□□□ 1.75
C9orf3-216ENST00000478603 TMEM62Q0P6H9 643 aa25.97■■□□□ 1.75
C9orf3-216ENST00000478603 CCDC12Q8WUD4 166 aaPredicted RBP25.97■■□□□ 1.75
C9orf3-216ENST00000478603 SLC26A6Q9BXS9 759 aa25.97■■□□□ 1.75
C9orf3-216ENST00000478603 LMCD1Q9NZU5 365 aa25.97■■□□□ 1.75
C9orf3-216ENST00000478603 XIRP2A4UGR9 3374 aa25.97■■□□□ 1.75
C9orf3-216ENST00000478603 MYH9P35579 1960 aaKnown RBP25.96■■□□□ 1.75
C9orf3-216ENST00000478603 POTEB3A0JP26 581 aa25.96■■□□□ 1.75
C9orf3-216ENST00000478603 BACH1O14867 736 aa25.96■■□□□ 1.75
C9orf3-216ENST00000478603 DHX15O43143 795 aaKnown RBP25.96■■□□□ 1.75
C9orf3-216ENST00000478603 BMP1P13497 986 aa25.96■■□□□ 1.75
C9orf3-216ENST00000478603 POTEBQ6S5H4 581 aa25.96■■□□□ 1.75
C9orf3-216ENST00000478603 ABHD15Q6UXT9 468 aa25.96■■□□□ 1.75
C9orf3-216ENST00000478603 NECAB3Q96P71 396 aaPredicted RBP25.96■■□□□ 1.75
C9orf3-216ENST00000478603 UHRF1Q96T88 793 aaPredicted RBP25.96■■□□□ 1.75
C9orf3-216ENST00000478603 EVPLQ92817 2033 aa25.96■■□□□ 1.75
C9orf3-216ENST00000478603 NCOR1O75376 2440 aa25.96■■□□□ 1.75
C9orf3-216ENST00000478603 IGKV6D-21A0A0A0MT36 114 aa25.95■■□□□ 1.74
C9orf3-216ENST00000478603 IPO5O00410 1097 aaKnown RBP25.95■■□□□ 1.74
C9orf3-216ENST00000478603 TOB2Q14106 344 aaPredicted RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms