RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 TSHZ1Q6ZSZ6 1077 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 NIPA1Q7RTP0 329 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 PLPPR4Q7Z2D5 763 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 COL4A6Q14031 1691 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 CHD7Q9P2D1 2997 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 UPP2O95045 317 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 BMP1P13497 986 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 PSMA5P28066 241 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 GNA11P29992 359 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 ACTR2P61160 394 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 SETQ01105 290 aaPredicted RBP16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 MRPL38Q96DV4 380 aaKnown RBP16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 IL17RAQ96F46 866 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 FTHL17Q9BXU8 183 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 C6orf50Q9HD87 102 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 SQORQ9Y6N5 450 aa16.46■□□□□ 0.23
SMARCE1-209ENST00000478349 TET1Q8NFU7 2136 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 ESYT2A0FGR8 921 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 BACH1O14867 736 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 SCG2P13521 617 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 STAT5BP51692 787 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 IGBP1P78318 339 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 MRPS6P82932 125 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 FUT2Q10981 343 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 PFKFB3Q16875 520 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 EPC2Q52LR7 807 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 ODR4Q5SWX8 454 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 KRT40Q6A162 431 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 RUFY4Q6ZNE9 571 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 FIBCD1Q8N539 461 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 DNAJB3Q8WWF6 145 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 JAKMIP1Q96N16 626 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 C17orf80Q9BSJ5 609 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 MYO9BQ13459 2157 aa16.45■□□□□ 0.22
SMARCE1-209ENST00000478349 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 MEIS1O00470 390 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 CHRNA1P02708 482 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 INSRRP14616 1297 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 KCNQ1P51787 676 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 COL9A3Q14050 684 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 TMEM192Q8IY95 271 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 NME8Q8N427 588 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 C1QTNF1Q9BXJ1 281 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 FAM49AQ9H0Q0 323 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 AGO4Q9HCK5 861 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 TRPV2Q9Y5S1 764 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 CDY2AQ9Y6F7 541 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 MYH7BA7E2Y1 1941 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 TRIP12Q14669 1992 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
SMARCE1-209ENST00000478349 VCANP13611 3396 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 NID2Q14112 1375 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 POTEB3A0JP26 581 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 H3BNC9 293 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 RB1P06400 928 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 CTNNB1P35222 781 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 CLK2P49760 499 aaKnown RBP16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 MGAT3Q09327 533 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 GPM6BQ13491 265 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 LPIN1Q14693 890 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 PUS10Q3MIT2 529 aaKnown RBP16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 FBXO47Q5MNV8 452 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 POTEBQ6S5H4 581 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 SPRED2Q7Z698 418 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 PLA2G4DQ86XP0 818 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 BRF1Q92994 677 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 PGBD1Q96JS3 809 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 ZMYND12Q9H0C1 365 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 UBE2ZQ9H832 354 aaPredicted RBP16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 TBC1D22BQ9NU19 505 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 FAM50BQ9Y247 325 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 TELO2Q9Y4R8 837 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 PCDHA2Q9Y5H9 948 aa16.43■□□□□ 0.22
SMARCE1-209ENST00000478349 COL1A2P08123 1366 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 SMIM35A0A1B0GVV1 85 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 EPB41L2O43491 1005 aaKnown RBP16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 NCK2O43639 380 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 HBP1O60381 514 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 CDC27P30260 824 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 HSPA4P34932 840 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 PAK2Q13177 524 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 PLCB4Q15147 1175 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 MARCH8Q5T0T0 291 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 Q6ZUG5 572 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 FBXL16Q8N461 479 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 KCNB2Q92953 911 aa16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 LMAN2LQ9H0V9 348 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms