RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 MMP1P03956 469 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 KCNA2P16389 499 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 KIF5BP33176 963 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 ADAM15Q13444 863 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 SMAD4Q13485 552 aaKnown RBP11.1□□□□□ -0.63
CCM2-210ENST00000478169 GRIK4Q16099 956 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 FBXO47Q5MNV8 452 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 TSHZ1Q6ZSZ6 1077 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 FAM43BQ6ZT52 329 aaPredicted RBP11.1□□□□□ -0.63
CCM2-210ENST00000478169 CTCFLQ8NI51 663 aaPredicted RBP11.1□□□□□ -0.63
CCM2-210ENST00000478169 PPP2R3CQ969Q6 453 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 MFSD14AQ96MC6 490 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 LZTS2Q9BRK4 669 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 MTA3Q9BTC8 594 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 SMARCAD1Q9H4L7 1026 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
CCM2-210ENST00000478169 PLAGL2Q9UPG8 496 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 SUPT16HQ9Y5B9 1047 aaKnown RBP11.1□□□□□ -0.63
CCM2-210ENST00000478169 SQORQ9Y6N5 450 aa11.1□□□□□ -0.63
CCM2-210ENST00000478169 FNDC1Q4ZHG4 1894 aaPredicted RBP11.09□□□□□ -0.63
CCM2-210ENST00000478169 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 ATP9AO75110 1047 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 DDAH1O94760 285 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 MRE11P49959 708 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 GNAQP50148 359 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 NHLH1Q02575 133 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 PTH1RQ03431 593 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 DLX2Q07687 328 aaPredicted RBP11.09□□□□□ -0.63
CCM2-210ENST00000478169 HERC4Q5GLZ8 1057 aaPredicted RBP11.09□□□□□ -0.63
CCM2-210ENST00000478169 MARCH8Q5T0T0 291 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 TTC22Q5TAA0 569 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 IER5Q5VY09 327 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 CMTR2Q8IYT2 770 aaKnown RBP11.09□□□□□ -0.63
CCM2-210ENST00000478169 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 PIBF1Q8WXW3 757 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 GLG1Q92896 1179 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 TNPO1Q92973 898 aaKnown RBP11.09□□□□□ -0.63
CCM2-210ENST00000478169 FBXL18Q96ME1 805 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 CD207Q9UJ71 328 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 CDY2AQ9Y6F7 541 aa11.09□□□□□ -0.63
CCM2-210ENST00000478169 STXBP3O00186 592 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 TBX10O75333 385 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 EYA4O95677 639 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 GSPT1P15170 499 aaKnown RBP11.08□□□□□ -0.64
CCM2-210ENST00000478169 ITGB5P18084 799 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 CHMLP26374 656 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 MARK3P27448 753 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 ANTXR2P58335 489 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 MRPS6P82932 125 aaKnown RBP11.08□□□□□ -0.64
CCM2-210ENST00000478169 MTMR1Q13613 665 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 CAMK1Q14012 370 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 CLUL1Q15846 466 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 HFE2Q6ZVN8 426 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 NPAS4Q8IUM7 802 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 MB21D2Q8IYB1 491 aaPredicted RBP11.08□□□□□ -0.64
CCM2-210ENST00000478169 ZNF654Q8IZM8 581 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 TMTC2Q8N394 836 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 IGFLR1Q9H665 355 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 AGO3Q9H9G7 860 aaKnown RBP11.08□□□□□ -0.64
CCM2-210ENST00000478169 LY9Q9HBG7 655 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 ALG13Q9NP73 1137 aaKnown RBP11.08□□□□□ -0.64
CCM2-210ENST00000478169 UBIAD1Q9Y5Z9 338 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 MYH9P35579 1960 aaKnown RBP11.08□□□□□ -0.64
CCM2-210ENST00000478169 PLXNA4Q9HCM2 1894 aa11.08□□□□□ -0.64
CCM2-210ENST00000478169 WDFY4Q6ZS81 3184 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 M0QZ92 97 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 ITGB1P05556 798 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 STAG3L1P0CL83 205 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 INSRRP14616 1297 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 CD52P31358 61 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 GTF2F1P35269 517 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCM2-210ENST00000478169 BMP8AQ7Z5Y6 402 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 RTN4RL1Q86UN2 441 aaPredicted RBP11.07□□□□□ -0.64
CCM2-210ENST00000478169 RNF135Q8IUD6 432 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 EFHBQ8N7U6 833 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 SPPL3Q8TCT6 385 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 LINC01599Q8WXQ3 324 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 EDAQ92838 391 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 MAP4K1Q92918 833 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 MSLNLQ96KJ4 702 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 JADE2Q9NQC1 790 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 MUTYHQ9UIF7 546 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 TRPV2Q9Y5S1 764 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 MRPL42Q9Y6G3 142 aaKnown RBP11.07□□□□□ -0.64
CCM2-210ENST00000478169 TAF6LQ9Y6J9 622 aa11.07□□□□□ -0.64
CCM2-210ENST00000478169 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 SPDYE3A6NKU9 549 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 LINC01565O15544 149 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 SGSM2O43147 1006 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 CALM1P0DP23 149 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 CALM2P0DP24 149 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 CALM3P0DP25 149 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 NDUFV1P49821 464 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 IGBP1P78318 339 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 COASYQ13057 564 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 PKN1Q16512 942 aa11.06□□□□□ -0.64
CCM2-210ENST00000478169 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms