RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 TET1Q8NFU7 2136 aa13.06□□□□□ -0.32
RPSA-207ENST00000478027 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 DDX39AO00148 427 aaKnown RBP13.05□□□□□ -0.32
RPSA-207ENST00000478027 GNAT1P11488 350 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 CSF2RAP15509 400 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 SLC26A2P50443 739 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 HIC1Q14526 733 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 EARS2Q5JPH6 523 aaKnown RBP13.05□□□□□ -0.32
RPSA-207ENST00000478027 ABHD15Q6UXT9 468 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 SERINC5Q86VE9 423 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 FAM184AQ8NB25 1140 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 FBXO18Q8NFZ0 1043 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 ETNPPLQ8TBG4 499 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 AFAP1L1Q8TED9 768 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 DHX38Q92620 1227 aaKnown RBP13.05□□□□□ -0.32
RPSA-207ENST00000478027 RNPEPQ9H4A4 650 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
RPSA-207ENST00000478027 TCEAL9Q9UHQ7 104 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 NRCAMQ92823 1304 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 EVPLQ92817 2033 aa13.05□□□□□ -0.32
RPSA-207ENST00000478027 GAS7O60861 476 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 PSMD10O75832 226 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 STAT5BP51692 787 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 FOSBP53539 338 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 EPHB4P54760 987 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 CCL23P55773 120 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 ADAM17P78536 824 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 ZNF200P98182 395 aaPredicted RBP13.04□□□□□ -0.32
RPSA-207ENST00000478027 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPSA-207ENST00000478027 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
RPSA-207ENST00000478027 ATP6V0A1Q93050 837 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 UIMC1Q96RL1 719 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 SIP14410 1827 aa13.04□□□□□ -0.32
RPSA-207ENST00000478027 LOXHD1Q8IVV2 1947 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 BACH1O14867 736 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 TBX3O15119 743 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 SLC37A4O43826 429 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 CCNT1O60563 726 aaKnown RBP13.03□□□□□ -0.32
RPSA-207ENST00000478027 PSAPP07602 524 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 MARK3P27448 753 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 RFC2P35250 354 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 PPFIA1Q13136 1202 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 SHHQ15465 462 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
RPSA-207ENST00000478027 LRIT3Q3SXY7 679 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 C9orf50Q5SZB4 431 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 CCDC60Q8IWA6 550 aaPredicted RBP13.03□□□□□ -0.32
RPSA-207ENST00000478027 LMBR1Q8WVP7 490 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 FAM20AQ96MK3 541 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
RPSA-207ENST00000478027 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 SETD4Q9NVD3 440 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 PCDHA10Q9Y5I2 948 aa13.03□□□□□ -0.32
RPSA-207ENST00000478027 MBLAC1A4D2B0 266 aaPredicted RBP13.02□□□□□ -0.33
RPSA-207ENST00000478027 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 TREHO43280 583 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 CAND2O75155 1236 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
RPSA-207ENST00000478027 PFKMP08237 780 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 IQCF3P0C7M6 154 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 CKBP12277 381 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 SELPP16109 830 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 SFNP31947 248 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 JAK3P52333 1124 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 GUCY1B3Q02153 619 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 PLCB4Q15147 1175 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 GRIK4Q16099 956 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 SWSAP1Q6NVH7 229 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 PSRC1Q6PGN9 363 aaPredicted RBP13.02□□□□□ -0.33
RPSA-207ENST00000478027 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 RPUSD2Q8IZ73 545 aaKnown RBP13.02□□□□□ -0.33
RPSA-207ENST00000478027 RDM1Q8NG50 284 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 WNT8BQ93098 351 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 SCLYQ96I15 445 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.02□□□□□ -0.33not detected■■■□□ 17
RPSA-207ENST00000478027 ZNF302Q9NR11 478 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.33
RPSA-207ENST00000478027 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 SZT2Q5T011 3432 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 GBF1Q92538 1859 aa13.02□□□□□ -0.33
RPSA-207ENST00000478027 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
RPSA-207ENST00000478027 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
RPSA-207ENST00000478027 INSRRP14616 1297 aa13.01□□□□□ -0.33
RPSA-207ENST00000478027 MARCH8Q5T0T0 291 aa13.01□□□□□ -0.33
RPSA-207ENST00000478027 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
RPSA-207ENST00000478027 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
RPSA-207ENST00000478027 LRRC8DQ7L1W4 858 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms