RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ZBED6P86452 979 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 IFRD2Q12894 506 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 RASA3Q14644 834 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 DDB1Q16531 1140 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 DACT2Q5SW24 774 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 ANKRD45Q5TZF3 282 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 MPZL3Q6UWV2 235 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 HDGFL2Q7Z4V5 671 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 KIAA0907Q7Z7F0 614 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 RASSF3Q86WH2 238 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SKAP1Q86WV1 359 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 IFNL2Q8IZJ0 200 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SPICE1Q8N0Z3 855 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 MNS1Q8NEH6 495 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 PPHLN1Q8NEY8 458 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SMCR8Q8TEV9 937 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SHISA4Q96DD7 197 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 CDK5RAP3Q96JB5 506 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 JMJD8Q96S16 334 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SRPK1Q96SB4 655 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 CSRNP2Q9H175 543 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SLC6A17Q9H1V8 727 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 DHX36Q9H2U1 1008 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 CRTAC1Q9NQ79 661 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 CHCHD3Q9NX63 227 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SNTG2Q9NY99 539 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 FAM53CQ9NYF3 392 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 IMPACTQ9P2X3 320 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 IP6K2Q9UHH9 426 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 INTUQ9ULD6 942 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 GTF2A1LQ9UNN4 478 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 YBX2Q9Y2T7 364 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 IKBKGQ9Y6K9 419 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 CHD1O14646 1710 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 A0A1W2PQ27 194 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 A0A1W2PQ64 194 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 A0A1W2PQC6 194 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 A0A1W2PQD8 194 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 FAM170AA1A519 330 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 KLRG2A4D1S0 409 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 ZNF503-AS2A6NEH8 195 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 GOLGA6L22H0YM25 854 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 MPHOSPH10O00566 681 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 CAPNS1P04632 268 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 SCG5P05408 212 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 THBDP07204 575 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC175P0C221 793 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 U2AF1L5P0DN76 240 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 PLS3P13797 630 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 PRKCAP17252 672 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 ENPP1P22413 925 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 L1CAMP32004 1257 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 DDIT3P35638 169 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 ARL4AP40617 200 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 ECI1P42126 302 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 MAGEA8P43361 318 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 KCNJ6P48051 423 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 NAP1L1P55209 391 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 GFRA1P56159 465 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 CORO7P57737 925 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 KRT83P78385 493 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 U2AF1Q01081 240 aaKnown RBP eCLIP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 SSRP1Q08945 709 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 LAPTM5Q13571 262 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 PLBD1Q6P4A8 553 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 CPLX2Q6PUV4 134 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 SPATC1Q76KD6 591 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 DAAM2Q86T65 1068 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 NUP43Q8NFH3 380 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 ZFPM2Q8WW38 1151 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 ATRIPQ8WXE1 791 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 SYAP1Q96A49 352 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 SKA1Q96BD8 255 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 TRMT2BQ96GJ1 504 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 LIN37Q96GY3 246 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 INTS4Q96HW7 963 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 SPAG5Q96R06 1193 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 MAP7D2Q96T17 732 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 LZTS2Q9BRK4 669 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 AARSD1Q9BTE6 412 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 SPATA9Q9BWV2 254 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.1□□□□□ -1.759e-12■□□□□ 10.7
FNDC3B-209ENST00000478016 SLKQ9H2G2 1235 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 GPRC5CQ9NQ84 441 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 CLEC1BQ9P126 229 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 PFDN2Q9UHV9 154 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 ACSL6Q9UKU0 697 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 RNF114Q9Y508 228 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 PAXBP1Q9Y5B6 917 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 WASHC2AQ641Q2 1341 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 IFT140Q96RY7 1462 aa4.1□□□□□ -1.75
FNDC3B-209ENST00000478016 CFAP65Q6ZU64 1925 aaKnown RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 FAM221BA6H8Z2 402 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 LRRC10BA6NIK2 292 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 FIBPO43427 364 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 EFEMP2O95967 443 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC172P0C7W6 258 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 FGFR1P11362 822 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms