RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CNNM2Q9H8M5 875 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 TUBE1Q9UJT0 475 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 MYO15AQ9UKN7 3530 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 MBLAC1A4D2B0 266 aaPredicted RBP23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 PPFIA1Q13136 1202 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 SEC23AQ15436 765 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 NPAS4Q8IUM7 802 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 KLHL23Q8NBE8 558 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 POF1BQ8WVV4 589 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 RILPL2Q969X0 211 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 IRF2BPLQ9H1B7 796 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 RIOX1Q9H6W3 641 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 CDY2AQ9Y6F7 541 aa23.4■■□□□ 1.34
PDLIM1-202ENST00000477757 SP4Q02446 784 aa23.39■■□□□ 1.33
PDLIM1-202ENST00000477757 IMMTQ16891 758 aaKnown RBP23.39■■□□□ 1.33
PDLIM1-202ENST00000477757 AGO3Q9H9G7 860 aaKnown RBP23.39■■□□□ 1.33
PDLIM1-202ENST00000477757 KAT6AQ92794 2004 aa23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 ATF7P17544 494 aaPredicted RBP23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 TCF7P36402 384 aaPredicted RBP23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 GRIK4Q16099 956 aa23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 DNAJB3Q8WWF6 145 aa23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 DSCC1Q9BVC3 393 aa23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 FTHL17Q9BXU8 183 aa23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 RTEL1Q9NZ71 1219 aa23.38■■□□□ 1.33
PDLIM1-202ENST00000477757 PLXNA4Q9HCM2 1894 aa23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 RPLP2P05387 115 aaKnown RBP23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 CD52P31358 61 aa23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 MRPS6P82932 125 aaKnown RBP23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 FOXK2Q01167 660 aa23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 GRM4Q14833 912 aa23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 MARCH8Q5T0T0 291 aa23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 RBM23Q86U06 439 aaKnown RBP23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 GIMAP8Q8ND71 665 aaPredicted RBP23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 SUSD6Q92537 303 aa23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 RPGRIP1Q96KN7 1286 aa23.37■■□□□ 1.33
PDLIM1-202ENST00000477757 PNMA6FA0A0J9YX94 578 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 CYTH3O43739 400 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 PTPN21Q16825 1174 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 PAN2Q504Q3 1202 aaKnown RBP23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 PCNX4Q63HM2 1172 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 XRRA1Q6P2D8 792 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 ERAP1Q9NZ08 941 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 PCDHGC5Q9Y5F6 944 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 SQORQ9Y6N5 450 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 PLXNA3P51805 1871 aa23.36■■□□□ 1.33
PDLIM1-202ENST00000477757 FSD2A1L4K1 749 aa23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 STAG3L1P0CL83 205 aa23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 AVPR2P30518 371 aa23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 CWC27Q6UX04 472 aaKnown RBP23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 RTN4RL1Q86UN2 441 aaPredicted RBP23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 ATP8B4Q8TF62 1192 aa23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 ATOH1Q92858 354 aaPredicted RBP23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 TLE6Q9H808 572 aa23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 DIAPH3Q9NSV4 1193 aa23.35■■□□□ 1.33
PDLIM1-202ENST00000477757 SCG2P13521 617 aa23.34■■□□□ 1.33
PDLIM1-202ENST00000477757 MARK3P27448 753 aa23.34■■□□□ 1.33
PDLIM1-202ENST00000477757 NUBP1P53384 320 aa23.34■■□□□ 1.33
PDLIM1-202ENST00000477757 VN1R2Q8NFZ6 395 aa23.34■■□□□ 1.33
PDLIM1-202ENST00000477757 BAZ2BQ9UIF8 2168 aaKnown RBP23.33■■□□□ 1.33
PDLIM1-202ENST00000477757 PROB1E7EW31 1015 aa23.33■■□□□ 1.33
PDLIM1-202ENST00000477757 UBE3AQ05086 875 aa23.33■■□□□ 1.33
PDLIM1-202ENST00000477757 HDAC1Q13547 482 aaPredicted RBP23.33■■□□□ 1.33
PDLIM1-202ENST00000477757 CYB5R4Q7L1T6 521 aa23.33■■□□□ 1.33
PDLIM1-202ENST00000477757 NLRX1Q86UT6 975 aa23.33■■□□□ 1.33
PDLIM1-202ENST00000477757 KCNA2P16389 499 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 GATMP50440 423 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 RBM10P98175 930 aaKnown RBP23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 IER5Q5VY09 327 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 GPRASP2Q96D09 838 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 CDCA3Q99618 268 aaPredicted RBP23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 LNPKQ9C0E8 428 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 FAM49AQ9H0Q0 323 aaPredicted RBP23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 TRPV2Q9Y5S1 764 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 VPS13AQ96RL7 3174 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 IGSF9BQ9UPX0 1349 aa23.32■■□□□ 1.32
PDLIM1-202ENST00000477757 GSTTP1A0A1W2PQM5 241 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 PAK2Q13177 524 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 DUSP6Q16828 381 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 SMARCC2Q8TAQ2 1214 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 SEPT1Q8WYJ6 367 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 GLG1Q92896 1179 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 CDHR1Q96JP9 859 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 NEK1Q96PY6 1258 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 SMARCAD1Q9H4L7 1026 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 TLR9Q9NR96 1032 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 PADI3Q9ULW8 664 aa23.31■■□□□ 1.32
PDLIM1-202ENST00000477757 M0QZ92 97 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 PIK3CDO00329 1044 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 PER2O15055 1255 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 ATP9AO75110 1047 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 IGBP1P78318 339 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 USP17L6PQ6QN14 398 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 ZBTB10Q96DT7 871 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 LRFN2Q9ULH4 789 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 PCDHB12Q9Y5F1 795 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 DMDP11532 3685 aa23.3■■□□□ 1.32
PDLIM1-202ENST00000477757 RRN3P2A6NIE6 340 aa23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 H0Y858 1186 aa23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 HIP1O00291 1037 aa23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 GALR2O43603 387 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms