RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MTMR1Q13613 665 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 NCAPH2Q6IBW4 605 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 C4orf19Q8IY42 314 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 SHCBP1Q8NEM2 672 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 ST6GALNAC4Q9H4F1 302 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 TMOD4Q9NZQ9 345 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 GOLGA6L19H0YKK7 550 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 PPP1R2P41236 205 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 AMPD3Q01432 767 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 PDE4DQ08499 809 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 TGFB1I1O43294 461 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 GYPCP04921 128 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 EEF1GP26641 437 aaKnown RBP13.51□□□□□ -0.25
PRPF39-203ENST00000477626 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-203ENST00000477626 OLIG1Q8TAK6 271 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 BRI3BPQ8WY22 251 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 TBC1D22BQ9NU19 505 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 DMAC2Q9NW81 257 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 DNAH12Q6ZR08 3092 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 LOC102724159A0A0B4J2E5 919 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 A0A1W2PQC6 194 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 EIF2AK2P19525 551 aaKnown RBP13.51□□□□□ -0.25
PRPF39-203ENST00000477626 CNTN2Q02246 1040 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 CTTNQ14247 550 aaKnown RBP13.51□□□□□ -0.25
PRPF39-203ENST00000477626 PWP2Q15269 919 aaKnown RBP13.51□□□□□ -0.25
PRPF39-203ENST00000477626 NYAP1Q6ZVC0 841 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 LXNQ9BS40 222 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 TEKT3Q9BXF9 490 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-203ENST00000477626 CSADQ9Y600 493 aa13.51□□□□□ -0.25
PRPF39-203ENST00000477626 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 RALGAPA2Q2PPJ7 1873 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 RBM47A0AV96 593 aaKnown RBP13.5□□□□□ -0.25
PRPF39-203ENST00000477626 FAM155AB1AL88 458 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-203ENST00000477626 TPM3P06753 285 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 ANO5Q75V66 913 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 RARRES1P49788 294 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 STX17P56962 302 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 UBASH3AP57075 661 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 PRKG1Q13976 671 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 ANKRD23Q86SG2 305 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 NSUN6Q8TEA1 469 aaKnown RBP13.5□□□□□ -0.25
PRPF39-203ENST00000477626 LRRC27Q9C0I9 530 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 SLC39A2Q9NP94 309 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 HOMER2Q9NSB8 354 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 BECN2A8MW95 431 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 ZBTB42B2RXF5 422 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 KCNJ18B7U540 433 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 CCND2P30279 289 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 ASIC1P78348 528 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 KCNJ12Q14500 433 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 PTPN21Q16825 1174 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 E4F1Q66K89 784 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-203ENST00000477626 GPBP1Q86WP2 473 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 SPC24Q8NBT2 197 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 NOC3LQ8WTT2 800 aaKnown RBP13.5□□□□□ -0.25
PRPF39-203ENST00000477626 RRAGCQ9HB90 399 aa13.5□□□□□ -0.25
PRPF39-203ENST00000477626 EIF3DO15371 548 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF39-203ENST00000477626 MAPTP10636 758 aaKnown RBP13.49□□□□□ -0.25
PRPF39-203ENST00000477626 COPB1P53618 953 aaKnown RBP13.49□□□□□ -0.25
PRPF39-203ENST00000477626 UBE4BO95155 1302 aa13.49□□□□□ -0.25
PRPF39-203ENST00000477626 GAS7O60861 476 aa13.49□□□□□ -0.25
PRPF39-203ENST00000477626 MAP1SQ66K74 1059 aaPredicted RBP13.49□□□□□ -0.25
PRPF39-203ENST00000477626 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
PRPF39-203ENST00000477626 AFAP1L1Q8TED9 768 aa13.49□□□□□ -0.25
PRPF39-203ENST00000477626 ODF2LQ9ULJ1 636 aa13.49□□□□□ -0.25
PRPF39-203ENST00000477626 MAPK8IP1Q9UQF2 711 aa13.49□□□□□ -0.25
PRPF39-203ENST00000477626 P4HBP07237 508 aaKnown RBP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 ZBTB48P10074 688 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 ERGIC2Q96RQ1 377 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 BHMT2Q9H2M3 363 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 EXOC1Q9NV70 894 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 ARIH2O95376 493 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 USP27XA6NNY8 438 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 FARP2O94887 1054 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 MYBP10242 640 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 KCNA1Q09470 495 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 FIGNQ5HY92 759 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 FASTKD5Q7L8L6 764 aaKnown RBP13.48□□□□□ -0.25
PRPF39-203ENST00000477626 BANK1Q8NDB2 785 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
PRPF39-203ENST00000477626 DNM3Q9UQ16 869 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms