RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 NPY5RQ15761 445 aa24.73■■□□□ 1.55
COL9A3-211ENST00000477612 ABHD15Q6UXT9 468 aa24.73■■□□□ 1.55
COL9A3-211ENST00000477612 C22orf23Q9BZE7 217 aa24.73■■□□□ 1.55
COL9A3-211ENST00000477612 AZI2Q9H6S1 392 aa24.73■■□□□ 1.55
COL9A3-211ENST00000477612 TBC1D22BQ9NU19 505 aa24.73■■□□□ 1.55
COL9A3-211ENST00000477612 STK36Q9NRP7 1315 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 IPO5O00410 1097 aaKnown RBP24.72■■□□□ 1.55
COL9A3-211ENST00000477612 EFCAB14O75071 495 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 CDKL5O76039 1030 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 CCNE2O96020 404 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 SLC26A2P50443 739 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 STAT5BP51692 787 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 RABGGTBP53611 331 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 PPFIA1Q13136 1202 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 GRIK4Q16099 956 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 TCTN1Q2MV58 587 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 MARCH8Q5T0T0 291 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 TAF2Q6P1X5 1199 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 MYLIPQ8WY64 445 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 TNPO1Q92973 898 aaKnown RBP24.72■■□□□ 1.55
COL9A3-211ENST00000477612 LENG9Q96B70 501 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 NKX2-4Q9H2Z4 354 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 CHD7Q9P2D1 2997 aa24.72■■□□□ 1.55
COL9A3-211ENST00000477612 RRN3P2A6NIE6 340 aa24.71■■□□□ 1.55
COL9A3-211ENST00000477612 MARK3P27448 753 aa24.71■■□□□ 1.55
COL9A3-211ENST00000477612 WDR5P61964 334 aaKnown RBP24.71■■□□□ 1.55
COL9A3-211ENST00000477612 MKRN4PQ13434 485 aaPredicted RBP24.71■■□□□ 1.55
COL9A3-211ENST00000477612 PLEKHG4Q58EX7 1191 aa24.71■■□□□ 1.55
COL9A3-211ENST00000477612 BLIDQ8IZY5 108 aa24.71■■□□□ 1.55
COL9A3-211ENST00000477612 ZNF577Q9BSK1 485 aa24.71■■□□□ 1.55
COL9A3-211ENST00000477612 SLC28A3Q9HAS3 691 aa24.71■■□□□ 1.55
COL9A3-211ENST00000477612 LOXHD1Q8IVV2 1947 aa24.71■■□□□ 1.55
COL9A3-211ENST00000477612 EYSQ5T1H1 3165 aa24.7■■□□□ 1.54
COL9A3-211ENST00000477612 INSRRP14616 1297 aa24.7■■□□□ 1.54
COL9A3-211ENST00000477612 IKBKEQ14164 716 aa24.7■■□□□ 1.54
COL9A3-211ENST00000477612 PLCB4Q15147 1175 aa24.7■■□□□ 1.54
COL9A3-211ENST00000477612 HERC6Q8IVU3 1022 aa24.7■■□□□ 1.54
COL9A3-211ENST00000477612 AIFM3Q96NN9 605 aa24.7■■□□□ 1.54
COL9A3-211ENST00000477612 EVPLQ92817 2033 aa24.69■■□□□ 1.54
COL9A3-211ENST00000477612 CTDNEP1O95476 244 aa24.69■■□□□ 1.54
COL9A3-211ENST00000477612 RPLP2P05387 115 aaKnown RBP24.69■■□□□ 1.54
COL9A3-211ENST00000477612 KCNJ6P48051 423 aa24.69■■□□□ 1.54
COL9A3-211ENST00000477612 PRR16Q569H4 304 aa24.69■■□□□ 1.54
COL9A3-211ENST00000477612 ZNF746Q6NUN9 644 aaPredicted RBP24.69■■□□□ 1.54
COL9A3-211ENST00000477612 DBF4BQ8NFT6 615 aa24.69■■□□□ 1.54
COL9A3-211ENST00000477612 TUBE1Q9UJT0 475 aa24.69■■□□□ 1.54
COL9A3-211ENST00000477612 CYP3A7-CYP3A51PA0A087WV96 503 aa24.68■■□□□ 1.54
COL9A3-211ENST00000477612 MYOGP15173 224 aa24.68■■□□□ 1.54
COL9A3-211ENST00000477612 CYP3A7P24462 503 aa24.68■■□□□ 1.54
COL9A3-211ENST00000477612 RUFY4Q6ZNE9 571 aa24.68■■□□□ 1.54
COL9A3-211ENST00000477612 TBCKQ8TEA7 893 aa24.68■■□□□ 1.54
COL9A3-211ENST00000477612 PHF20Q9BVI0 1012 aa24.68■■□□□ 1.54
COL9A3-211ENST00000477612 KIF28PB7ZC32 967 aa24.67■■□□□ 1.54
COL9A3-211ENST00000477612 DDX39AO00148 427 aaKnown RBP24.67■■□□□ 1.54
COL9A3-211ENST00000477612 FOSL2P15408 326 aa24.67■■□□□ 1.54
COL9A3-211ENST00000477612 MGAT3Q09327 533 aa24.67■■□□□ 1.54
COL9A3-211ENST00000477612 ME3Q16798 604 aa24.67■■□□□ 1.54
COL9A3-211ENST00000477612 FAM160B1Q5W0V3 765 aa24.67■■□□□ 1.54
COL9A3-211ENST00000477612 CCDC60Q8IWA6 550 aaPredicted RBP24.67■■□□□ 1.54
COL9A3-211ENST00000477612 SMAP1Q8IYB5 467 aaPredicted RBP24.67■■□□□ 1.54
COL9A3-211ENST00000477612 OSBPL7Q9BZF2 842 aa24.67■■□□□ 1.54
COL9A3-211ENST00000477612 POTEB3A0JP26 581 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 CHRNA1P02708 482 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 NEK4P51957 841 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 DEFB103AP81534 67 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 KRT76Q01546 638 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 Q4G0T1 1027 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 MIS18BP1Q6P0N0 1132 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 POTEBQ6S5H4 581 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 MOXD1Q6UVY6 613 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 MBOAT7Q96N66 472 aa24.66■■□□□ 1.54
COL9A3-211ENST00000477612 MAFBQ9Y5Q3 323 aaPredicted RBP24.66■■□□□ 1.54
COL9A3-211ENST00000477612 MSH4O15457 936 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 HBP1O60381 514 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 CTSHP09668 335 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 XBP1P17861 261 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 PPP2R2DQ66LE6 453 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 RSPH3Q86UC2 560 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 APBB2Q92870 758 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 GTF3C6Q969F1 213 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 RIT2Q99578 217 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 ZNF302Q9NR11 478 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 TRPC6Q9Y210 931 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 PCDHA2Q9Y5H9 948 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 PCDHA10Q9Y5I2 948 aa24.65■■□□□ 1.54
COL9A3-211ENST00000477612 TRANK1O15050 2925 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 GJB5O95377 273 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 CA3P07451 260 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 FDPSP14324 419 aaKnown RBP24.64■■□□□ 1.54
COL9A3-211ENST00000477612 ATP4AP20648 1035 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 C8orf34Q49A92 452 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 SWSAP1Q6NVH7 229 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 SLC17A8Q8NDX2 589 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 MAFAQ8NHW3 353 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-211ENST00000477612 ATP8B4Q8TF62 1192 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 DNAJB3Q8WWF6 145 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 SEPT8Q92599 483 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 SLC5A5Q92911 643 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 PRDM12Q9H4Q4 367 aa24.64■■□□□ 1.54
COL9A3-211ENST00000477612 KCNJ14Q9UNX9 436 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms