RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ARSHQ5FYA8 562 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 POTEBQ6S5H4 581 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 ZBTB9Q96C00 473 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 INPP4AQ96PE3 977 aaPredicted RBP19.85■□□□□ 0.77
CCM2-209ENST00000477605 PSMB7Q99436 277 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 CAPS2Q9BXY5 557 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 FGFBP2Q9BYJ0 223 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 TBC1D7Q9P0N9 293 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 PCDHA1Q9Y5I3 950 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 A0A087X0T9 212 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 PDXKO00764 312 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 CALUO43852 315 aaPredicted RBP19.85■□□□□ 0.77
CCM2-209ENST00000477605 FAM228BP0C875 321 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 CORO7P57737 925 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 TNNC1P63316 161 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 CDC37Q16543 378 aaPredicted RBP19.85■□□□□ 0.77
CCM2-209ENST00000477605 KCTD1Q719H9 257 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 CLEC10AQ8IUN9 316 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 CD302Q8IX05 232 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 SYT2Q8N9I0 419 aaPredicted RBP19.85■□□□□ 0.77
CCM2-209ENST00000477605 WHAMMQ8TF30 809 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 CRYGNQ8WXF5 182 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 PBKQ96KB5 322 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCM2-209ENST00000477605 METTL14Q9HCE5 456 aaKnown RBP19.85■□□□□ 0.77
CCM2-209ENST00000477605 PPEF1O14829 653 aaPredicted RBP19.84■□□□□ 0.77
CCM2-209ENST00000477605 MED24O75448 989 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 FOSP01100 380 aaPredicted RBP19.84■□□□□ 0.77
CCM2-209ENST00000477605 NR2F2P24468 414 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 RPA1P27694 616 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 KNOP1Q1ED39 458 aaKnown RBP19.84■□□□□ 0.77
CCM2-209ENST00000477605 EPM2AIP1Q7L775 607 aaPredicted RBP19.84■□□□□ 0.77
CCM2-209ENST00000477605 C10orf67Q8IYJ2 551 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 TAF4BQ92750 862 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 FAM20AQ96MK3 541 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 FHDC1Q9C0D6 1143 aaPredicted RBP19.84■□□□□ 0.77
CCM2-209ENST00000477605 SMARCAL1Q9NZC9 954 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 ARMCX3Q9UH62 379 aaPredicted RBP19.84■□□□□ 0.77
CCM2-209ENST00000477605 HDAC9Q9UKV0 1011 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 DNM3Q9UQ16 869 aa19.84■□□□□ 0.77
CCM2-209ENST00000477605 MPHOSPH10O00566 681 aaKnown RBP19.83■□□□□ 0.77
CCM2-209ENST00000477605 AFPP02771 609 aaKnown RBP19.83■□□□□ 0.77
CCM2-209ENST00000477605 ERCC3P19447 782 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 PRKCIP41743 596 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 GIT2Q14161 759 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 BMT2Q1RMZ1 405 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 EMC10Q5UCC4 262 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 CDC42EP5Q6NZY7 148 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 TEX2Q8IWB9 1127 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 IQCKQ8N0W5 287 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 CERS5Q8N5B7 392 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 TSEN2Q8NCE0 465 aaKnown RBP19.83■□□□□ 0.77
CCM2-209ENST00000477605 ETNPPLQ8TBG4 499 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 MS4A14Q96JA4 679 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 KANSL2Q9H9L4 492 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 EHD2Q9NZN4 543 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 ADAMTS1Q9UHI8 967 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 LRRC37AA6NMS7 1700 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 LTBP1Q14766 1721 aa19.83■□□□□ 0.77
CCM2-209ENST00000477605 USP17L15C9J2P7 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L13C9JLJ4 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L11C9JVI0 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L18D6R9N7 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L22D6RA61 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L17D6RBQ6 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L19D6RCP7 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L20D6RJB6 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 SLC16A3O15427 465 aaKnown RBP19.83■□□□□ 0.76
CCM2-209ENST00000477605 HEXIM1O94992 359 aaKnown RBP19.83■□□□□ 0.76
CCM2-209ENST00000477605 RPL13P26373 211 aaKnown RBP19.83■□□□□ 0.76
CCM2-209ENST00000477605 POLD1P28340 1107 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 SPIRE1Q08AE8 756 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L24Q0WX57 530 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 DPY19L2P1Q6NXN4 242 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 USP17L6PQ6QN14 398 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 IRF2BP2Q7Z5L9 587 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 FAM133AQ8N9E0 248 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 GJA10Q969M2 543 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 TEKT1Q969V4 418 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 ZC3H12CQ9C0D7 883 aaKnown RBP19.83■□□□□ 0.76
CCM2-209ENST00000477605 TMEM59LQ9UK28 342 aa19.83■□□□□ 0.76
CCM2-209ENST00000477605 NPHP3-ACAD11A0A0J9YXS1 232 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 GLI1P08151 1106 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 CATSPER3Q86XQ3 398 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 USP38Q8NB14 1042 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 SYT17Q9BSW7 474 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 MRIQ9BWK5 157 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 EPB41L5Q9HCM4 733 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 GREB1LQ9C091 1923 aaPredicted RBP19.82■□□□□ 0.76
CCM2-209ENST00000477605 MEIS2O14770 477 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 TRIM66O15016 1216 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 EIF3HO15372 352 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCM2-209ENST00000477605 FTCDO95954 541 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 MYBP10242 640 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 ARHGAP4P98171 946 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 RPS6KA1Q15418 735 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 CFAP58Q5T655 872 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 MSL1Q68DK7 614 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 TRIM34Q9BYJ4 488 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 INTUQ9ULD6 942 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms