RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 L2HGDHQ9H9P8 463 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 NKIRAS1Q9NYS0 192 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 FAM237AA0A1B0GTK4 181 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 IRX3P78415 501 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 NT5DC1Q5TFE4 455 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 JMJD4Q9H9V9 463 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 LRRN2O75325 713 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 ATP2A2P16615 1042 aaKnown RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 GFPT1Q06210 699 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 TAOK1Q7L7X3 1001 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 IQCGQ9H095 443 aaKnown RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 EPC1Q9H2F5 836 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 FEM1BQ9UK73 627 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 APBB1IPQ7Z5R6 666 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 RTFDC1Q9BY42 306 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 MLXIPQ9HAP2 919 aa15.93■□□□□ 0.14
HDAC6-220ENST00000477528 SETD1AO15047 1707 aaKnown RBP15.93■□□□□ 0.14
HDAC6-220ENST00000477528 RGPD1P0DJD0 1748 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 SARSP49591 514 aaKnown RBP15.92■□□□□ 0.14
HDAC6-220ENST00000477528 POLGP54098 1239 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-220ENST00000477528 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-220ENST00000477528 PDXDC2PQ6P474 469 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 KMT5AQ9NQR1 393 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 GLE1Q53GS7 698 aaKnown RBP15.92■□□□□ 0.14
HDAC6-220ENST00000477528 PDXDC1Q6P996 788 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 ANKRD35Q8N283 1001 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 GLG1Q92896 1179 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 ZNF341Q9BYN7 854 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 PPFIA4O75335 1185 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 EMBQ6PCB8 327 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 DHX37Q8IY37 1157 aaKnown RBP15.92■□□□□ 0.14
HDAC6-220ENST00000477528 CDHR1Q96JP9 859 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 FAM114A2Q9NRY5 505 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 ABCB11O95342 1321 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 PALMO75781 387 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 VIMP08670 466 aaKnown RBP15.92■□□□□ 0.14
HDAC6-220ENST00000477528 ZNF18P17022 549 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 GBP1P32455 592 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 MXI1P50539 228 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 BPIFB4P59827 614 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 GIMAP7Q8NHV1 300 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 DYDC2Q96IM9 177 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 STIM2Q9P246 746 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 HDAC6Q9UBN7 1215 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 SEL1LQ9UBV2 794 aa15.92■□□□□ 0.14
HDAC6-220ENST00000477528 INPP5BP32019 993 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 NAA35Q5VZE5 725 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 ADAT2Q7Z6V5 191 aaKnown RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 NEK9Q8TD19 979 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 MAK16Q9BXY0 300 aaKnown RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 UBE2TQ9NPD8 197 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 TBX3O15119 743 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 CIAPIN1Q6FI81 312 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 CEP170P1Q96L14 293 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 CSADQ9Y600 493 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 ATP1A1P05023 1023 aaKnown RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 CD19P15391 556 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 MESDQ14696 234 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 CDKAL1Q5VV42 579 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 SEPT9Q9UHD8 586 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 EIF2AK2P19525 551 aaKnown RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 CCND2P30279 289 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 YWHAEP62258 255 aaKnown RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 PTK2Q05397 1052 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 EARS2Q5JPH6 523 aaKnown RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 INTS8Q75QN2 995 aaKnown RBP15.91■□□□□ 0.14
HDAC6-220ENST00000477528 AGPAT5Q9NUQ2 364 aa15.91■□□□□ 0.14
HDAC6-220ENST00000477528 PPP2R5AQ15172 486 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 ALS2CLQ60I27 953 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 ZBTB8OSQ8IWT0 167 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 PAF1Q8N7H5 531 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 FAM81BQ96LP2 452 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 EIF2AK1Q9BQI3 630 aaKnown RBP15.9■□□□□ 0.14
HDAC6-220ENST00000477528 NRBP2Q9NSY0 501 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 LRRIQ4A6NIV6 560 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 ABCD1P33897 745 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 ATP1A2P50993 1020 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 FRMD5Q7Z6J6 570 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 OSBPL9Q96SU4 736 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 KBTBD4Q9NVX7 518 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 FAM205AQ6ZU69 1335 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 E7EVH7 732 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 EYA4O95677 639 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 NDUFB10O96000 172 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 ARHGAP25P42331 645 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 NSFP46459 744 aaKnown RBP15.9■□□□□ 0.14
HDAC6-220ENST00000477528 SLC7A5Q01650 507 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 ZNF710Q8N1W2 664 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 GRK7Q8WTQ7 553 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 RUNDC3BQ96NL0 473 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 DNAJC12Q9UKB3 198 aa15.9■□□□□ 0.14
HDAC6-220ENST00000477528 PDXKO00764 312 aa15.89■□□□□ 0.14
HDAC6-220ENST00000477528 RGS16O15492 202 aaPredicted RBP15.89■□□□□ 0.14
HDAC6-220ENST00000477528 GYS1P13807 737 aa15.89■□□□□ 0.14
HDAC6-220ENST00000477528 BCAS4Q8TDM0 211 aa15.89■□□□□ 0.14
HDAC6-220ENST00000477528 WHAMMQ8TF30 809 aa15.89■□□□□ 0.14
HDAC6-220ENST00000477528 A0A1W2PQJ5 194 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 SORBS3O60504 671 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 ENTPD3O75355 529 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms