RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RASEFQ8IZ41 740 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 FBXO18Q8NFZ0 1043 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 CCDC124Q96CT7 223 aaKnown RBP20.04■□□□□ 0.8
VARS2-209ENST00000477288 ZNF341Q9BYN7 854 aa20.04■□□□□ 0.8
VARS2-209ENST00000477288 MT-ND3P03897 115 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 FAM81BQ96LP2 452 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 HACD3Q9P035 362 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 GOLGA8IPA6NC78 632 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 GOLGA8JA6NMD2 632 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 LUC7L3O95232 432 aaKnown RBP20.03■□□□□ 0.8
VARS2-209ENST00000477288 ZNF18P17022 549 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 RBL2Q08999 1139 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 HABP4Q5JVS0 413 aaKnown RBP20.03■□□□□ 0.8
VARS2-209ENST00000477288 GSDMAQ96QA5 445 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.03■□□□□ 0.85e-7■■□□□ 12.9
VARS2-209ENST00000477288 TMEM94Q12767 1356 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 ABCD1P33897 745 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 ADD2P35612 726 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 ANTXR1Q9H6X2 564 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 MRPL47Q9HD33 250 aaKnown RBP20.03■□□□□ 0.8
VARS2-209ENST00000477288 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
VARS2-209ENST00000477288 NPR1P16066 1061 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 PMLP29590 882 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 CXCR5P32302 372 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 ART3Q13508 389 aa20.03■□□□□ 0.8
VARS2-209ENST00000477288 LRRD1A4D1F6 860 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 RWDD4Q6NW29 188 aaKnown RBP20.02■□□□□ 0.8
VARS2-209ENST00000477288 MSTO1Q9BUK6 570 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 CARMIL3Q8ND23 1372 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 PPP6R2O75170 966 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 CTTNQ14247 550 aaKnown RBP20.02■□□□□ 0.8
VARS2-209ENST00000477288 FAM133BQ5BKY9 247 aaKnown RBP20.02■□□□□ 0.8
VARS2-209ENST00000477288 GRAMD1CQ8IYS0 662 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 PNMA3Q9UL41 463 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 PCDHA5Q9Y5H7 936 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 KPNA2P52292 529 aaKnown RBP20.02■□□□□ 0.8
VARS2-209ENST00000477288 PARVGQ9HBI0 331 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 hCG_1984214I3L0E3 225 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 SH3BGRP55822 239 aaPredicted RBP20.02■□□□□ 0.8
VARS2-209ENST00000477288 SZRD1Q7Z422 152 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 FAM160B2Q86V87 743 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 ZNF713Q8N859 430 aaPredicted RBP20.02■□□□□ 0.8
VARS2-209ENST00000477288 THEGQ9P2T0 379 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 SFMBT1Q9UHJ3 866 aa20.02■□□□□ 0.8
VARS2-209ENST00000477288 SEC31AO94979 1220 aaKnown RBP20.02■□□□□ 0.79
VARS2-209ENST00000477288 MOCS3O95396 460 aa20.02■□□□□ 0.79
VARS2-209ENST00000477288 FTCDO95954 541 aa20.02■□□□□ 0.79
VARS2-209ENST00000477288 ETF1P62495 437 aaKnown RBP20.02■□□□□ 0.79
VARS2-209ENST00000477288 OR6B3Q8NGW1 331 aa20.02■□□□□ 0.79
VARS2-209ENST00000477288 PIP4K2CQ8TBX8 421 aa20.02■□□□□ 0.79
VARS2-209ENST00000477288 DRC3Q9H069 523 aa20.02■□□□□ 0.79
VARS2-209ENST00000477288 SCHIP1Q9P0W5 487 aaPredicted RBP20.02■□□□□ 0.79
VARS2-209ENST00000477288 MAN2A1Q16706 1144 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 CDO1Q16878 200 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 LSG1Q9H089 658 aaKnown RBP20.01■□□□□ 0.79
VARS2-209ENST00000477288 MED4Q9NPJ6 270 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 APBA1Q02410 837 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 HSP90AA5PQ58FG0 334 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 RTKN2Q8IZC4 609 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 CYP2D7A0A087X1C5 515 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 ARHGEF25Q86VW2 580 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.01■□□□□ 0.79
VARS2-209ENST00000477288 SLC39A14Q15043 492 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 ADCK5Q3MIX3 580 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 ARL13BQ3SXY8 428 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 ZNF658Q5TYW1 1059 aaPredicted RBP20.01■□□□□ 0.79
VARS2-209ENST00000477288 HSPH1Q92598 858 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 PPP1R13BQ96KQ4 1090 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 GPR108Q9NPR9 543 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 INTUQ9ULD6 942 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 PFDN1O60925 122 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 CATSPER4Q7RTX7 472 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 EFHD1Q9BUP0 239 aa20.01■□□□□ 0.79
VARS2-209ENST00000477288 TTI1O43156 1089 aa20■□□□□ 0.79
VARS2-209ENST00000477288 PLA2G4BP0C869 781 aa20■□□□□ 0.79
VARS2-209ENST00000477288 C2orf69Q8N8R5 385 aa20■□□□□ 0.79
VARS2-209ENST00000477288 ATP7BP35670 1465 aa20■□□□□ 0.79
VARS2-209ENST00000477288 PPP1R2P3Q6NXS1 205 aa20■□□□□ 0.79
VARS2-209ENST00000477288 PI16Q6UXB8 463 aa20■□□□□ 0.79
VARS2-209ENST00000477288 TTLL6Q8N841 843 aa20■□□□□ 0.79
VARS2-209ENST00000477288 EMILIN3Q9NT22 766 aa20■□□□□ 0.79
VARS2-209ENST00000477288 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
VARS2-209ENST00000477288 C21orf2O43822 256 aa20■□□□□ 0.79
VARS2-209ENST00000477288 CDC25AP30304 524 aa20■□□□□ 0.79
VARS2-209ENST00000477288 MXI1P50539 228 aa20■□□□□ 0.79
VARS2-209ENST00000477288 ARHGDIAP52565 204 aa20■□□□□ 0.79
VARS2-209ENST00000477288 FBXW4P57775 412 aa20■□□□□ 0.79
VARS2-209ENST00000477288 RNF219Q5W0B1 726 aaPredicted RBP20■□□□□ 0.79
VARS2-209ENST00000477288 RNF207Q6ZRF8 634 aa20■□□□□ 0.79
VARS2-209ENST00000477288 TCP11Q8WWU5 503 aa20■□□□□ 0.79
VARS2-209ENST00000477288 ESRRGP62508 458 aa20■□□□□ 0.79
VARS2-209ENST00000477288 NSUN2Q08J23 767 aaKnown RBP eCLIP20■□□□□ 0.79
VARS2-209ENST00000477288 ZWILCHQ9H900 591 aa20■□□□□ 0.79
VARS2-209ENST00000477288 IGSF1Q8N6C5 1336 aa20■□□□□ 0.79
VARS2-209ENST00000477288 MECOMQ03112 1051 aa19.99■□□□□ 0.79
VARS2-209ENST00000477288 SURF1Q15526 300 aa19.99■□□□□ 0.79
VARS2-209ENST00000477288 ZNF589Q86UQ0 364 aaPredicted RBP19.99■□□□□ 0.79
VARS2-209ENST00000477288 PLS3P13797 630 aa19.99■□□□□ 0.79
VARS2-209ENST00000477288 CEP19Q96LK0 163 aa19.99■□□□□ 0.79
VARS2-209ENST00000477288 MMTAG2Q9BU76 263 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms