RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CUTAO60888 179 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 SCG5P05408 212 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 SNRPB2P08579 225 aaKnown RBP4.63□□□□□ -1.67
XRN1-211ENST00000477237 HOXC12P31275 282 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 TUSC3Q13454 348 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 NFYCQ13952 458 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 SF1Q15637 639 aaKnown RBP4.63□□□□□ -1.67
XRN1-211ENST00000477237 LDLRAD1Q5T700 205 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 DENND5AQ6IQ26 1287 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 PPIL6Q8IXY8 311 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 JAM3Q9BX67 310 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 GPRC5BQ9NZH0 403 aa4.63□□□□□ -1.67
XRN1-211ENST00000477237 ARHGAP6O43182 974 aa4.62□□□□□ -1.67
XRN1-211ENST00000477237 PEX11BO96011 259 aa4.62□□□□□ -1.67
XRN1-211ENST00000477237 ERBB2P04626 1255 aa4.62□□□□□ -1.67
XRN1-211ENST00000477237 PDE6AP16499 860 aa4.62□□□□□ -1.67
XRN1-211ENST00000477237 C21orf58P58505 322 aa4.62□□□□□ -1.67
XRN1-211ENST00000477237 SLC25A3Q00325 362 aa4.62□□□□□ -1.67
XRN1-211ENST00000477237 SPTY2D1Q68D10 685 aaPredicted RBP4.62□□□□□ -1.67
XRN1-211ENST00000477237 PUF60Q9UHX1 559 aaKnown RBP4.62□□□□□ -1.67
XRN1-211ENST00000477237 TELO2Q9Y4R8 837 aa4.62□□□□□ -1.67
XRN1-211ENST00000477237 LMNAP02545 664 aaKnown RBP4.61□□□□□ -1.67
XRN1-211ENST00000477237 GCP02774 474 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 ITGAVP06756 1048 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 ZNF143P52747 638 aaPredicted RBP4.61□□□□□ -1.67
XRN1-211ENST00000477237 COL9A2Q14055 689 aaPredicted RBP4.61□□□□□ -1.67
XRN1-211ENST00000477237 RRP1BQ14684 758 aaKnown RBP4.61□□□□□ -1.67
XRN1-211ENST00000477237 COLEC12Q5KU26 742 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 PRIMA1Q86XR5 153 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 GPR135Q8IZ08 494 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 THEMISQ8N1K5 641 aaPredicted RBP4.61□□□□□ -1.67
XRN1-211ENST00000477237 TMEM87AQ8NBN3 555 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 OR6P1Q8NGX9 317 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 SCYL1Q96KG9 808 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 KIAA1683Q9H0B3 1180 aa4.61□□□□□ -1.67
XRN1-211ENST00000477237 CAPN14A8MX76 684 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 RPS6KA4O75676 772 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 NAT2P11245 290 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 ITGB6P18564 788 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 ETV4P43268 484 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 SOX9P48436 509 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 HHEXQ03014 270 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 GRM7Q14831 915 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 PCOLCEQ15113 449 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 ZNF326Q5BKZ1 582 aaKnown RBP4.6□□□□□ -1.67
XRN1-211ENST00000477237 LARP4Q71RC2 724 aaKnown RBP eCLIP4.6□□□□□ -1.67
XRN1-211ENST00000477237 D2HGDHQ8N465 521 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 MICAL1Q8TDZ2 1067 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 GIPC2Q8TF65 315 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 BCL2L13Q9BXK5 485 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 PDGFDQ9GZP0 370 aaPredicted RBP4.6□□□□□ -1.67
XRN1-211ENST00000477237 ADARB2Q9NS39 739 aaKnown RBP4.6□□□□□ -1.67
XRN1-211ENST00000477237 PPARGC1AQ9UBK2 798 aaKnown RBP4.6□□□□□ -1.67
XRN1-211ENST00000477237 EFR3BQ9Y2G0 817 aa4.6□□□□□ -1.67
XRN1-211ENST00000477237 CPP00450 1065 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 CASP7P55210 303 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 CCDC27Q2M243 656 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 MBNL2Q5VZF2 373 aaKnown RBP4.59□□□□□ -1.67
XRN1-211ENST00000477237 ADGRE4PQ86SQ3 457 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 TMEM176AQ96HP8 235 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 BCL11AQ9H165 835 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 MSL2Q9HCI7 577 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 SLC39A2Q9NP94 309 aa4.59□□□□□ -1.67
XRN1-211ENST00000477237 INO80B-WBP1J3KQ70 363 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 ACOT7O00154 380 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 PDIA4P13667 645 aaKnown RBP4.58□□□□□ -1.68
XRN1-211ENST00000477237 ZNF37AP17032 561 aaPredicted RBP4.58□□□□□ -1.68
XRN1-211ENST00000477237 ERCC3P19447 782 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 ZNF76P36508 570 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 KCNJ6P48051 423 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 RACK1P63244 317 aaKnown RBP4.58□□□□□ -1.68
XRN1-211ENST00000477237 CRHR2Q13324 411 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 GAREM2Q75VX8 874 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 OTOP3Q7RTS5 596 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 TMEM145Q8NBT3 493 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 C1orf159Q96HA4 380 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 BBC3Q96PG8 261 aaPredicted RBP4.58□□□□□ -1.68
XRN1-211ENST00000477237 INO80BQ9C086 356 aaPredicted RBP4.58□□□□□ -1.68
XRN1-211ENST00000477237 ZDHHC5Q9C0B5 715 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 NELFAQ9H3P2 528 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 RIOX1Q9H6W3 641 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 NPFFR2Q9Y5X5 522 aa4.58□□□□□ -1.68
XRN1-211ENST00000477237 MSCO60682 206 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 COL6A2P12110 1019 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 GFRA1P56159 465 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 PAPD7Q5XG87 772 aaKnown RBP4.57□□□□□ -1.68
XRN1-211ENST00000477237 SYCE2Q6PIF2 218 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 USP30Q70CQ3 517 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 MRGPREQ86SM8 312 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 ZNF227Q86WZ6 799 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 UHMK1Q8TAS1 419 aaKnown RBP4.57□□□□□ -1.68
XRN1-211ENST00000477237 SHDQ96IW2 340 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 NRDE2Q9H7Z3 1164 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 AGO3Q9H9G7 860 aaKnown RBP4.57□□□□□ -1.68
XRN1-211ENST00000477237 ZNHIT2Q9UHR6 403 aa4.57□□□□□ -1.68
XRN1-211ENST00000477237 CYP27B1O15528 508 aa4.56□□□□□ -1.68
XRN1-211ENST00000477237 HMGCRP04035 888 aa4.56□□□□□ -1.68
XRN1-211ENST00000477237 KCNQ1P51787 676 aa4.56□□□□□ -1.68
XRN1-211ENST00000477237 DPP8Q6V1X1 898 aaPredicted RBP4.56□□□□□ -1.68
XRN1-211ENST00000477237 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms