RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 APOBRQ0VD83 1088 aa17.9■□□□□ 0.46
SMG5-204ENST00000476954 PUM1Q14671 1186 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMG5-204ENST00000476954 QRICH1Q2TAL8 776 aa17.9■□□□□ 0.46
SMG5-204ENST00000476954 ADGRF4Q8IZF3 695 aa17.9■□□□□ 0.46
SMG5-204ENST00000476954 POMKQ9H5K3 350 aa17.9■□□□□ 0.46
SMG5-204ENST00000476954 ZBTB40Q9NUA8 1239 aa17.9■□□□□ 0.46
SMG5-204ENST00000476954 TCP11L1Q9NUJ3 509 aa17.9■□□□□ 0.46
SMG5-204ENST00000476954 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
SMG5-204ENST00000476954 KCNV1Q6PIU1 500 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 TMEM184AQ6ZMB5 413 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 VSIG10LQ86VR7 867 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 NPAS4Q8IUM7 802 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 CCDC105Q8IYK2 499 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 MAF1Q9H063 256 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 NR2E1Q9Y466 385 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 R4GN57 208 aa17.89■□□□□ 0.45
SMG5-204ENST00000476954 GPR179Q6PRD1 2367 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 FSCN2O14926 492 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 WEE2P0C1S8 567 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 NPR3P17342 541 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 HOXA13P31271 388 aaPredicted RBP17.88■□□□□ 0.45
SMG5-204ENST00000476954 HSD17B4P51659 736 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 PGM5Q15124 567 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 PLPP4Q5VZY2 271 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 ZBTB10Q96DT7 871 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 CDCA3Q99618 268 aaPredicted RBP17.88■□□□□ 0.45
SMG5-204ENST00000476954 VAT1LQ9HCJ6 419 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 MRPL11Q9Y3B7 192 aaKnown RBP17.88■□□□□ 0.45
SMG5-204ENST00000476954 CDY2AQ9Y6F7 541 aa17.88■□□□□ 0.45
SMG5-204ENST00000476954 NOP56O00567 594 aaKnown RBP17.87■□□□□ 0.45
SMG5-204ENST00000476954 LMNAP02545 664 aaKnown RBP17.87■□□□□ 0.45
SMG5-204ENST00000476954 GPATCH4Q5T3I0 446 aaKnown RBP17.87■□□□□ 0.45
SMG5-204ENST00000476954 TSHZ1Q6ZSZ6 1077 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 DCLK2Q8N568 766 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 DTWD2Q8NBA8 298 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 DNAJB3Q8WWF6 145 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 GPR20Q99678 358 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 ZKSCAN3Q9BRR0 538 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 DLL3Q9NYJ7 618 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 LIMD1Q9UGP4 676 aa17.87■□□□□ 0.45
SMG5-204ENST00000476954 FRYLO94915 3013 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 ATRXP46100 2492 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 HIDE1A8MVS5 230 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 FGF18O76093 207 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 AOC1P19801 751 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 CYFIP1Q7L576 1253 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 TMEM260Q9NX78 707 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 ZFHX4Q86UP3 3567 aa17.86■□□□□ 0.45
SMG5-204ENST00000476954 TGFB3P10600 412 aa17.85■□□□□ 0.45
SMG5-204ENST00000476954 SP4Q02446 784 aa17.85■□□□□ 0.45
SMG5-204ENST00000476954 UBE3AQ05086 875 aa17.85■□□□□ 0.45
SMG5-204ENST00000476954 SPOUT1Q5T280 376 aaKnown RBP17.85■□□□□ 0.45
SMG5-204ENST00000476954 STOX1Q6ZVD7 989 aa17.85■□□□□ 0.45
SMG5-204ENST00000476954 JMJD4Q9H9V9 463 aa17.85■□□□□ 0.45
SMG5-204ENST00000476954 PCDHB12Q9Y5F1 795 aa17.85■□□□□ 0.45
SMG5-204ENST00000476954 NRCAMQ92823 1304 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 DHX16O60231 1041 aaKnown RBP17.84■□□□□ 0.45
SMG5-204ENST00000476954 STAG3L1P0CL83 205 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 SRGAP2BP0DMP2 458 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 SCG2P13521 617 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 HAND2P61296 217 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 SEMA3FQ13275 785 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 KANK3Q6NY19 840 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 THNSL1Q8IYQ7 743 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 CYP2W1Q8TAV3 490 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 FEZF2Q8TBJ5 459 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 GPATCH3Q96I76 525 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 TTC14Q96N46 770 aa17.84■□□□□ 0.45
SMG5-204ENST00000476954 FANCMQ8IYD8 2048 aa17.83■□□□□ 0.45
SMG5-204ENST00000476954 PPP1R11O60927 126 aaPredicted RBP17.83■□□□□ 0.44
SMG5-204ENST00000476954 CCND2P30279 289 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 MRPS6P82932 125 aaKnown RBP17.83■□□□□ 0.44
SMG5-204ENST00000476954 GHRHRQ02643 423 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 RSPO4Q2I0M5 234 aaPredicted RBP17.83■□□□□ 0.44
SMG5-204ENST00000476954 TAF2Q6P1X5 1199 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 METTL7BQ6UX53 244 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 COLGALT1Q8NBJ5 622 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 RASGRP4Q8TDF6 673 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 HINFPQ9BQA5 517 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 ZNF215Q9UL58 517 aaPredicted RBP17.83■□□□□ 0.44
SMG5-204ENST00000476954 PADI3Q9ULW8 664 aa17.83■□□□□ 0.44
SMG5-204ENST00000476954 FSD2A1L4K1 749 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 FGAP02671 866 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 HOXB8P17481 243 aaPredicted RBP17.82■□□□□ 0.44
SMG5-204ENST00000476954 TMEM62Q0P6H9 643 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 PPFIA1Q13136 1202 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 MARCH8Q5T0T0 291 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 RIN2Q8WYP3 895 aaPredicted RBP17.82■□□□□ 0.44
SMG5-204ENST00000476954 TCF25Q9BQ70 676 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 FAM49AQ9H0Q0 323 aaPredicted RBP17.82■□□□□ 0.44
SMG5-204ENST00000476954 ADAM7Q9H2U9 754 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 TMX1Q9H3N1 280 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 ERVK-5Q9HDB9 667 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 TUBE1Q9UJT0 475 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 RALYQ9UKM9 306 aaKnown RBP17.82■□□□□ 0.44
SMG5-204ENST00000476954 LRFN2Q9ULH4 789 aa17.82■□□□□ 0.44
SMG5-204ENST00000476954 TBKBP1A7MCY6 615 aa17.81■□□□□ 0.44
SMG5-204ENST00000476954 MRPS9P82933 396 aaKnown RBP17.81■□□□□ 0.44
SMG5-204ENST00000476954 ALX1Q15699 326 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms