RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 C9orf50Q5SZB4 431 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 MFSD5Q6N075 450 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 C16orf59Q7L2K0 433 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 PLPPR4Q7Z2D5 763 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 LMBR1Q8WVP7 490 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 RIT2Q99578 217 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 LBHD1Q9BQE6 289 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-208ENST00000476739 TEKT3Q9BXF9 490 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 UBE2OQ9C0C9 1292 aaKnown RBP10.96□□□□□ -0.65
HDAC3-208ENST00000476739 FOXP1Q9H334 677 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-208ENST00000476739 ZNF302Q9NR11 478 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 ERAP1Q9NZ08 941 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
HDAC3-208ENST00000476739 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-208ENST00000476739 BACH1O14867 736 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 ACRP10323 421 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 INSRRP14616 1297 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 GCFC2P16383 781 aaKnown RBP10.95□□□□□ -0.66
HDAC3-208ENST00000476739 U2AF2P26368 475 aaKnown RBP eCLIP10.95□□□□□ -0.666e-7■■■■■ 29.6
HDAC3-208ENST00000476739 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-208ENST00000476739 IGBP1P78318 339 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 KRT76Q01546 638 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 FPGSQ05932 587 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 PPFIA1Q13136 1202 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 TRIM71Q2Q1W2 868 aaKnown RBP10.95□□□□□ -0.66
HDAC3-208ENST00000476739 MARCH8Q5T0T0 291 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 MIS18BP1Q6P0N0 1132 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 TRMT1LQ7Z2T5 733 aaKnown RBP10.95□□□□□ -0.66
HDAC3-208ENST00000476739 NOSTRINQ8IVI9 506 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-208ENST00000476739 AFAP1L1Q8TED9 768 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 ATP6V0A1Q93050 837 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 SNX21Q969T3 373 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 TMEM60Q9H2L4 133 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 AZI2Q9H6S1 392 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 DISC1Q9NRI5 854 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 GABBR1Q9UBS5 961 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 SAMM50Q9Y512 469 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 PCDHA10Q9Y5I2 948 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-208ENST00000476739 KAT6AQ92794 2004 aa10.95□□□□□ -0.66
HDAC3-208ENST00000476739 MYH9P35579 1960 aaKnown RBP10.95□□□□□ -0.66
HDAC3-208ENST00000476739 NRCAMQ92823 1304 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 IGSF9BQ9UPX0 1349 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 WDR64B1ANS9 1081 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 ZNF862O60290 1169 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 PSAPP07602 524 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 IQCF3P0C7M6 154 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 MCM7P33993 719 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 SPIRE1Q08AE8 756 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 PTK7Q13308 1070 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 GNL2Q13823 731 aaKnown RBP10.94□□□□□ -0.66
HDAC3-208ENST00000476739 GPNMBQ14956 572 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 SHHQ15465 462 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 ZNF174Q15697 407 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 GRIK4Q16099 956 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 HABP4Q5JVS0 413 aaKnown RBP10.94□□□□□ -0.66
HDAC3-208ENST00000476739 LARP1BQ659C4 914 aaKnown RBP10.94□□□□□ -0.66
HDAC3-208ENST00000476739 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 PDXDC2PQ6P474 469 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 TRAF7Q6Q0C0 670 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 RUFY4Q6ZNE9 571 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 SERINC5Q86VE9 423 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 FAM20AQ96MK3 541 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 MTMR9Q96QG7 549 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 OSBPL7Q9BZF2 842 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 TRPC6Q9Y210 931 aa10.94□□□□□ -0.66
HDAC3-208ENST00000476739 TANC1Q9C0D5 1861 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 TET1Q8NFU7 2136 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 MBLAC1A4D2B0 266 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-208ENST00000476739 TMEM150BA6NC51 233 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 ZBTB42B2RXF5 422 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 PITPNM1O00562 1244 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 TBX3O15119 743 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 NEMFO60524 1076 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 STBD1O95210 358 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 CKBP12277 381 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 JAK3P52333 1124 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 PPP2R5CQ13362 524 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 CALCRLQ16602 461 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 TTC38Q5R3I4 469 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 ZNF618Q5T7W0 954 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 FAM160B1Q5W0V3 765 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 DEFB128Q7Z7B8 93 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 TMEM199Q8N511 208 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 BANK1Q8NDB2 785 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 ATP8B4Q8TF62 1192 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 NAP1L4Q99733 375 aaKnown RBP10.93□□□□□ -0.66
HDAC3-208ENST00000476739 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDAC3-208ENST00000476739 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 KIF3AQ9Y496 699 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 PCDHB6Q9Y5E3 794 aa10.93□□□□□ -0.66
HDAC3-208ENST00000476739 RANBP2P49792 3224 aaKnown RBP10.92□□□□□ -0.66
HDAC3-208ENST00000476739 H3BQV1 296 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 MARCH6O60337 910 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms