RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 PCDHGA2Q9Y5H1 932 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 ALS2Q96Q42 1657 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 CUL9Q8IWT3 2517 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 WDR64B1ANS9 1081 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 ARVCFO00192 962 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 TRAF5O00463 557 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 DDX3YO15523 660 aaKnown RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 TLR5O60602 858 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 PQBP1O60828 265 aaKnown RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 ATP2A2P16615 1042 aaKnown RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 ECI1P42126 302 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 RING1Q06587 406 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 ACAP2Q15057 778 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 CLUL1Q15846 466 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 PLA2G4EQ3MJ16 856 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 CCDC93Q567U6 631 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 FAM117BQ6P1L5 589 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 LDHAL6AQ6ZMR3 332 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 SSH2Q76I76 1423 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 DEPTORQ8TB45 409 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 ZNF507Q8TCN5 953 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 CYB5D2Q8WUJ1 264 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 HPS1Q92902 700 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 BRF1Q92994 677 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 C1orf159Q96HA4 380 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 TEKT5Q96M29 485 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 TUBGCP6Q96RT7 1819 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 ISCA1Q9BUE6 129 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 TRPM3Q9HCF6 1732 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 CLIC5Q9NZA1 410 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 GDF2Q9UK05 429 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 ATXN7L1Q9ULK2 861 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 DIS3Q9Y2L1 958 aaKnown RBP8.16□□□□□ -1.1
LRCH3-215ENST00000476664 HIF3AQ9Y2N7 669 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHA8Q9Y5H6 950 aa8.16□□□□□ -1.1
LRCH3-215ENST00000476664 E9PCH4 1651 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 LRRC37A3O60309 1634 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 ECEL1O95672 775 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 SOD2P04179 222 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 THBS1P07996 1170 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 EIF5P55010 431 aaKnown RBP8.15□□□□□ -1.1
LRCH3-215ENST00000476664 ERVK-24P63145 666 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 RNF4P78317 190 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 AUHQ13825 339 aaKnown RBP8.15□□□□□ -1.1
LRCH3-215ENST00000476664 TMEM177Q53S58 311 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 NOL9Q5SY16 702 aaKnown RBP8.15□□□□□ -1.1
LRCH3-215ENST00000476664 ZBTB37Q5TC79 503 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 IGF2-ASQ6U949 168 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 CCDC149Q6ZUS6 474 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 RSRC2Q7L4I2 434 aaKnown RBP8.15□□□□□ -1.1
LRCH3-215ENST00000476664 TRIM22Q8IYM9 498 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 IL17REQ8NFR9 667 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 BAHD1Q8TBE0 780 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-215ENST00000476664 ABHD17AQ96GS6 310 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 CRB3Q9BUF7 120 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 CELF4Q9BZC1 486 aaKnown RBP8.15□□□□□ -1.1
LRCH3-215ENST00000476664 NRSN2Q9GZP1 204 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 TOR4AQ9NXH8 423 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 SAGE1Q9NXZ1 904 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 FRRS1LQ9P0K9 344 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 HDAC9Q9UKV0 1011 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
LRCH3-215ENST00000476664 CICQ96RK0 1608 aaPredicted RBP8.14□□□□□ -1.11
LRCH3-215ENST00000476664 NRXN1Q9ULB1 1477 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 KIAA0232Q92628 1395 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 PNPLA7Q6ZV29 1317 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 RHOBTB3O94955 611 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 ZRANB2O95218 330 aaKnown RBP eCLIP8.14□□□□□ -1.11
LRCH3-215ENST00000476664 AGR2O95994 175 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 MAPK9P45984 424 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 GPR85P60893 370 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 SUGP1Q8IWZ8 645 aaKnown RBP8.14□□□□□ -1.11
LRCH3-215ENST00000476664 MIER2Q8N344 545 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 EFHBQ8N7U6 833 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 NAXEQ8NCW5 288 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 NGDNQ8NEJ9 315 aaKnown RBP8.14□□□□□ -1.11
LRCH3-215ENST00000476664 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.14□□□□□ -1.11
LRCH3-215ENST00000476664 GCC1Q96CN9 775 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 NAP1L5Q96NT1 182 aaPredicted RBP8.14□□□□□ -1.11
LRCH3-215ENST00000476664 RSAD1Q9HA92 442 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 PCDHGB3Q9Y5G1 929 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 FHOD1Q9Y613 1164 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 AKAP12Q02952 1782 aa8.14□□□□□ -1.11
LRCH3-215ENST00000476664 PTPDC1A2A3K4 754 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 A6NNZ2 444 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 FAM227AF5H4B4 570 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 FIBPO43427 364 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 TNFAIP3P21580 790 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 GRK2P25098 689 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 SCAND1P57086 179 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 ZNF267Q14586 743 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-215ENST00000476664 ARHGAP44Q17R89 818 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 PPM1JQ5JR12 505 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 ATAT1Q5SQI0 421 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-215ENST00000476664 BROXQ5VW32 411 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 KCNT2Q6UVM3 1135 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 SLC41A1Q8IVJ1 513 aa8.13□□□□□ -1.11
LRCH3-215ENST00000476664 KCT2Q8NC54 265 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms