RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 PRR16Q569H4 304 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 ZNF746Q6NUN9 644 aaPredicted RBP11.58□□□□□ -0.56
CCM2-208ENST00000476594 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 CYP2W1Q8TAV3 490 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 LMBR1Q8WVP7 490 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 SEPT8Q92599 483 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 APBB2Q92870 758 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 CTAGE1Q96RT6 745 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 CXXC1Q9P0U4 656 aaPredicted RBP11.58□□□□□ -0.56
CCM2-208ENST00000476594 SAMM50Q9Y512 469 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 LAMA2P24043 3122 aaKnown RBP11.58□□□□□ -0.56
CCM2-208ENST00000476594 KAT6AQ92794 2004 aa11.58□□□□□ -0.56
CCM2-208ENST00000476594 IGLV3-22A0A075B6J6 115 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 WDR64B1ANS9 1081 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 FAM86B1E9PN63 330 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 DDX39AO00148 427 aaKnown RBP11.57□□□□□ -0.56
CCM2-208ENST00000476594 HBP1O60381 514 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 FAM86B2P0C5J1 330 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 FOSL2P15408 326 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 ZNF200P98182 395 aaPredicted RBP11.57□□□□□ -0.56
CCM2-208ENST00000476594 ITGB3BPQ13352 177 aaPredicted RBP11.57□□□□□ -0.56
CCM2-208ENST00000476594 IER5Q5VY09 327 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 PPP2R2DQ66LE6 453 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 MOXD1Q6UVY6 613 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 FAM43BQ6ZT52 329 aaPredicted RBP11.57□□□□□ -0.56
CCM2-208ENST00000476594 RPAINQ86UA6 219 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 RASGRP4Q8TDF6 673 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 TBCKQ8TEA7 893 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 CRYGNQ8WXF5 182 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 FAM167AQ96KS9 214 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
CCM2-208ENST00000476594 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 ZNF302Q9NR11 478 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 ORC3Q9UBD5 711 aaPredicted RBP11.57□□□□□ -0.56
CCM2-208ENST00000476594 TPCN1Q9ULQ1 816 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 CEP131Q9UPN4 1083 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 DOCK5Q9H7D0 1870 aa11.57□□□□□ -0.56
CCM2-208ENST00000476594 COL1A2P08123 1366 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 TRIP12Q14669 1992 aaPredicted RBP11.56□□□□□ -0.56
CCM2-208ENST00000476594 GAS7O60861 476 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 NBNO60934 754 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 ATG7O95352 703 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 AMHP03971 560 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 CTSHP09668 335 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
CCM2-208ENST00000476594 SFNP31947 248 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 JAK3P52333 1124 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 WDR5P61964 334 aaKnown RBP11.56□□□□□ -0.56
CCM2-208ENST00000476594 IGBP1P78318 339 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 ODR4Q5SWX8 454 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 GTF3C6Q969F1 213 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 GUCD1Q96NT3 240 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 RIT2Q99578 217 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 CDX2Q99626 313 aaPredicted RBP11.56□□□□□ -0.56
CCM2-208ENST00000476594 TTYH1Q9H313 450 aaPredicted RBP11.56□□□□□ -0.56
CCM2-208ENST00000476594 PCDHA10Q9Y5I2 948 aa11.56□□□□□ -0.56
CCM2-208ENST00000476594 MBLAC1A4D2B0 266 aaPredicted RBP11.55□□□□□ -0.56
CCM2-208ENST00000476594 GRXCR1A8MXD5 290 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 TLL1O43897 1013 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 MARCH6O60337 910 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 INSRRP14616 1297 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 ADAM17P78536 824 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 Q4G0T1 1027 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 ZNF484Q5JVG2 852 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 FAM26DQ5JW98 314 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 LRCH2Q5VUJ6 765 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 ABHD15Q6UXT9 468 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 HERC6Q8IVU3 1022 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 NME8Q8N427 588 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 USP38Q8NB14 1042 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 RDM1Q8NG50 284 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 ATP8B4Q8TF62 1192 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
CCM2-208ENST00000476594 ZSCAN31Q96LW9 406 aaPredicted RBP11.55□□□□□ -0.56
CCM2-208ENST00000476594 PHF20Q9BVI0 1012 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 NKX2-4Q9H2Z4 354 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 SCN5AQ14524 2016 aa11.55□□□□□ -0.56
CCM2-208ENST00000476594 IGKV6D-21A0A0A0MT36 114 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 DKC1O60832 514 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCM2-208ENST00000476594 KRT2P35908 639 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 PBX2P40425 430 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 SAFBQ15424 915 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCM2-208ENST00000476594 PLEKHG4Q58EX7 1191 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 SWSAP1Q6NVH7 229 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 NEK8Q86SG6 692 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 SLC17A8Q8NDX2 589 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 DBF4BQ8NFT6 615 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 MYLIPQ8WY64 445 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 WNT8BQ93098 351 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 PCYT2Q99447 389 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 IFIH1Q9BYX4 1025 aaKnown RBP11.54□□□□□ -0.56
CCM2-208ENST00000476594 SH2B1Q9NRF2 756 aaPredicted RBP11.54□□□□□ -0.56
CCM2-208ENST00000476594 DISC1Q9NRI5 854 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms