RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ADRA2BP18089 450 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 SLC9A1P19634 815 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CTNNA2P26232 953 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CDK8P49336 464 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PPP2R5DQ14738 602 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CYP4F22Q6NT55 531 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CCDC170Q8IYT3 715 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PSMD1Q99460 953 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 TRIM51Q9BSJ1 452 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 HEMGNQ9BXL5 484 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 HSD3B7Q9H2F3 369 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 GGA3Q9NZ52 723 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CNOT7Q9UIV1 285 aaKnown RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 SNX24Q9Y343 169 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PRRC2BQ5JSZ5 2229 aaKnown RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 A0A1B0GTH6 734 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 A0A1W2PRG0 241 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 RSPH10B2B2RC85 870 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 H7C1D1 291 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CETN3O15182 167 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 HLA-DOAP06340 250 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 LDHCP07864 332 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 RSPH10BP0C881 870 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 BIRC3Q13489 604 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PKN1Q16512 942 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 ZC2HC1CQ53FD0 456 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CCDC105Q8IYK2 499 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 FLAD1Q8NFF5 587 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 STAG1Q8WVM7 1258 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 NAA15Q9BXJ9 866 aaKnown RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PLCB1Q9NQ66 1216 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 ASIC3Q9UHC3 531 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 FEZ2Q9UHY8 353 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 LOC102724159A0A0B4J2E5 919 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 FOXO6A8MYZ6 492 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PPP1R12BO60237 982 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 IRX3P78415 501 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 TROAPQ12815 778 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PWP2Q15269 919 aaKnown RBP5.46□□□□□ -1.54
CCDC39-204ENST00000476379 DLGAP5Q15398 846 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 CFAP221Q4G0U5 840 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PASD1Q8IV76 773 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 EHBP1Q8NDI1 1231 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 KCNB2Q92953 911 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 ZNF287Q9HBT7 754 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 GPR108Q9NPR9 543 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 TMEM51Q9NW97 253 aa5.46□□□□□ -1.54
CCDC39-204ENST00000476379 PARP4Q9UKK3 1724 aaKnown RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 MYMKA6NI61 221 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 PRPF3O43395 683 aaKnown RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 BBOX1O75936 387 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 BMP15O95972 392 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 FAM153BP0C7A2 387 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 KCNJ1P48048 391 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 OSTNP61366 133 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 TNIP1Q15025 636 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 IL17AQ16552 155 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 FAM153CQ494X1 144 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 CYP2W1Q8TAV3 490 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 GOLGA5Q8TBA6 731 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 KCNV2Q8TDN2 545 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 CUL5Q93034 780 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 NSUN4Q96CB9 384 aaKnown RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 FAM153AQ9UHL3 310 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 RIC1Q4ADV7 1423 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 TMEM150BA6NC51 233 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 DDTLA6NHG4 134 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 PHF20L1A8MW92 1017 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 TNFAIP3P21580 790 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 KLRC1P26715 233 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 CASP4P49662 377 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 DYNLT1P63172 113 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 WHAMMP3Q1A5X7 153 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 B4GALNT4Q76KP1 1039 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 GLYCTKQ8IVS8 523 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 CCDC65Q8IXS2 484 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 HOOK2Q96ED9 719 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 BTBD6Q96KE9 485 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 CSRNP1Q96S65 589 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 L2HGDHQ9H9P8 463 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 SLC24A3Q9HC58 644 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 ALG13Q9NP73 1137 aaKnown RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 RWDD2AQ9UIY3 292 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 INTUQ9ULD6 942 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 TTC7AQ9ULT0 858 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 PCDHA6Q9UN73 950 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 HPSEQ9Y251 543 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 PCDHA8Q9Y5H6 950 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 FAM169AQ9Y6X4 670 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 CRYBG1Q9Y4K1 1723 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 SCN11AQ9UI33 1791 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 NRAPQ86VF7 1730 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 SALL1Q9NSC2 1324 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 TESPA1A2RU30 521 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 H0Y3Z8 333 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 GOLGA8SH3BPF8 625 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 GOLGA8MH3BSY2 632 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 SOCS7O14512 581 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 DAPK3O43293 454 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms