RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 CNOT6Q9ULM6 557 aaKnown RBP7.08□□□□□ -1.28
SSR3-206ENST00000476217 SMG5Q9UPR3 1016 aaKnown RBP7.08□□□□□ -1.28
SSR3-206ENST00000476217 NRXN1Q9ULB1 1477 aa7.08□□□□□ -1.28
SSR3-206ENST00000476217 ADGRF5Q8IZF2 1346 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 IQGAP1P46940 1657 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 IRS4O14654 1257 aaPredicted RBP7.07□□□□□ -1.28
SSR3-206ENST00000476217 GSTA4O15217 222 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 CDR1P51861 262 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 CAP1Q01518 475 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 SPIRE1Q08AE8 756 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 TRIM61Q5EBN2 209 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 FOXB2Q5VYV0 432 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 MTDHQ86UE4 582 aaKnown RBP7.07□□□□□ -1.28
SSR3-206ENST00000476217 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 TRIM48Q8IWZ4 208 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 USP35Q9P2H5 1018 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 PTCH2Q9Y6C5 1203 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 PIK3C2GO75747 1445 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 RIMS2Q9UQ26 1411 aa7.07□□□□□ -1.28
SSR3-206ENST00000476217 KCNQ2O43526 872 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
SSR3-206ENST00000476217 C6orf222P0C671 652 aaPredicted RBP7.06□□□□□ -1.28
SSR3-206ENST00000476217 LINC00310P59036 64 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 STEAP3Q658P3 488 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 CIAPIN1Q6FI81 312 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 KCNT2Q6UVM3 1135 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 MILR1Q7Z6M3 343 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 NOP9Q86U38 636 aaKnown RBP7.06□□□□□ -1.28
SSR3-206ENST00000476217 LILRB2Q8N423 598 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 SMOC1Q9H4F8 434 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 KCNK12Q9HB15 430 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 SLC6A20Q9NP91 592 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 FAN1Q9Y2M0 1017 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 CEP170BQ9Y4F5 1589 aaPredicted RBP7.06□□□□□ -1.28
SSR3-206ENST00000476217 SETBP1Q9Y6X0 1596 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 POLR1AO95602 1720 aaPredicted RBP7.06□□□□□ -1.28
SSR3-206ENST00000476217 GPRASP1Q5JY77 1395 aa7.06□□□□□ -1.28
SSR3-206ENST00000476217 ZNF142P52746 1687 aaPredicted RBP7.06□□□□□ -1.28
SSR3-206ENST00000476217 ZFYVE9O95405 1425 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 WNT9AO14904 365 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 SGSM2O43147 1006 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 MSCO60682 206 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 SOD2P04179 222 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 FBLN1P23142 703 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 PAK1Q13153 545 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 ZNF124Q15973 351 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 ETV3LQ6ZN32 361 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 ZC3H18Q86VM9 953 aaKnown RBP7.05□□□□□ -1.28
SSR3-206ENST00000476217 MIB1Q86YT6 1006 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.05□□□□□ -1.28
SSR3-206ENST00000476217 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.05□□□□□ -1.28
SSR3-206ENST00000476217 SGPP1Q9BX95 441 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 FBXL7Q9UJT9 491 aa7.05□□□□□ -1.28
SSR3-206ENST00000476217 EIF3AQ14152 1382 aaKnown RBP7.05□□□□□ -1.28
SSR3-206ENST00000476217 PTPRMP28827 1452 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 SCAF11Q99590 1463 aaKnown RBP7.04□□□□□ -1.28
SSR3-206ENST00000476217 PLD2O14939 933 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 TADA3O75528 432 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 ASGR2P07307 311 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 GNAT1P11488 350 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 IGFBP6P24592 240 aaPredicted RBP7.04□□□□□ -1.28
SSR3-206ENST00000476217 CACNB2Q08289 660 aaPredicted RBP7.04□□□□□ -1.28
SSR3-206ENST00000476217 FNDC3BQ53EP0 1204 aaKnown RBP7.04□□□□□ -1.28
SSR3-206ENST00000476217 FAM47CQ5HY64 1035 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 SH3TC2Q8TF17 1288 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 DDX11Q96FC9 970 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 TMEM260Q9NX78 707 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 SFMBT1Q9UHJ3 866 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 PALD1Q9ULE6 856 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 TMEM2Q9UHN6 1383 aa7.04□□□□□ -1.28
SSR3-206ENST00000476217 BLACEA4D250 179 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 EPHB3P54753 998 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 GUCY1A3Q02108 690 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 OTOP3Q7RTS5 596 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 B3GNT8Q7Z7M8 397 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 FAM126BQ8IXS8 530 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 GSTCDQ8NEC7 633 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 MAGEB10Q96LZ2 347 aaPredicted RBP7.03□□□□□ -1.28
SSR3-206ENST00000476217 NCOA5Q9HCD5 579 aaKnown RBP7.03□□□□□ -1.28
SSR3-206ENST00000476217 TRAF6Q9Y4K3 522 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 KCTD3Q9Y597 815 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 HCFC2Q9Y5Z7 792 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 ADGRB1O14514 1584 aa7.03□□□□□ -1.28
SSR3-206ENST00000476217 SLIT1O75093 1534 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 ALKQ9UM73 1620 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 ST20-MTHFSA0A0A6YYL1 179 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 ARVCFO00192 962 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 NPTXRO95502 500 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 PMLP29590 882 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 HOMER1Q86YM7 354 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 SIAH1Q8IUQ4 282 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 THEMISQ8N1K5 641 aaPredicted RBP7.02□□□□□ -1.29
SSR3-206ENST00000476217 TTLL11Q8NHH1 800 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 FBXW5Q969U6 566 aa7.02□□□□□ -1.29
SSR3-206ENST00000476217 YIPF4Q9BSR8 244 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms