RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZNF839A8K0R7 811 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 ARHGAP44Q17R89 818 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 NT5DC1Q5TFE4 455 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 CPZQ66K79 652 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 ZNF761Q86XN6 746 aaPredicted RBP9.35□□□□□ -0.91
SMC5-203ENST00000475540 IGDCC4Q8TDY8 1250 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 WNK4Q96J92 1243 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 XYLT2Q9H1B5 865 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 USP40Q9NVE5 1235 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 ARHGAP28Q9P2N2 729 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 RAPGEFL1Q9UHV5 662 aa9.35□□□□□ -0.91
SMC5-203ENST00000475540 PRAMEF25A6NGN4 478 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 M0R2C6 588 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 HIP1RO75146 1068 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 C4BPAP04003 597 aaKnown RBP9.34□□□□□ -0.91
SMC5-203ENST00000475540 ZNF28P17035 718 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 HOXA5P20719 270 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 GLRBP48167 497 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 MLLT6P55198 1093 aaPredicted RBP9.34□□□□□ -0.91
SMC5-203ENST00000475540 GJA9P57773 515 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 ZNF460Q14592 562 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 RTP5Q14D33 572 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 TRMT10BQ6PF06 316 aaKnown RBP9.34□□□□□ -0.91
SMC5-203ENST00000475540 TXNDC5Q8NBS9 432 aaKnown RBP9.34□□□□□ -0.91
SMC5-203ENST00000475540 CABP5Q9NP86 173 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 SLC39A2Q9NP94 309 aa9.34□□□□□ -0.91
SMC5-203ENST00000475540 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
SMC5-203ENST00000475540 JMJD7P0C870 316 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 HERVK_113P62684 666 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 KIAA2012Q0VF49 1180 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 TKFCQ3LXA3 575 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 RGL3Q3MIN7 710 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 CFAP100Q494V2 611 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 PHF19Q5T6S3 580 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 PIK3R6Q5UE93 754 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 PKN3Q6P5Z2 889 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 FAM124AQ86V42 546 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 NOSTRINQ8IVI9 506 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 NINJ1Q92982 152 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 KCNH7Q9NS40 1196 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 ZFP69BQ9UJL9 534 aa9.33□□□□□ -0.92
SMC5-203ENST00000475540 TLDC2A0PJX2 215 aa9.32□□□□□ -0.92
SMC5-203ENST00000475540 NOBOXO60393 691 aa9.32□□□□□ -0.92
SMC5-203ENST00000475540 GLRX3O76003 335 aaKnown RBP9.32□□□□□ -0.92
SMC5-203ENST00000475540 SMAD2Q15796 467 aaKnown RBP9.32□□□□□ -0.92
SMC5-203ENST00000475540 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
SMC5-203ENST00000475540 FEZ1Q99689 392 aa9.32□□□□□ -0.92
SMC5-203ENST00000475540 BOCQ9BWV1 1114 aa9.32□□□□□ -0.92
SMC5-203ENST00000475540 TMEM168Q9H0V1 697 aa9.32□□□□□ -0.92
SMC5-203ENST00000475540 FTSJ1Q9UET6 329 aa9.32□□□□□ -0.92
SMC5-203ENST00000475540 CHGBP05060 677 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 IRF9Q00978 393 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 SEC23AQ15436 765 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 OTOP1Q7RTM1 612 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 FRMD5Q7Z6J6 570 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 STPG3Q8N7X2 389 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 CHST14Q8NCH0 376 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 TBX22Q9Y458 520 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 B3GALT1Q9Y5Z6 326 aa9.31□□□□□ -0.92
SMC5-203ENST00000475540 MROH6A6NGR9 719 aa9.3□□□□□ -0.92
SMC5-203ENST00000475540 C9orf118A6NHY6 69 aa9.3□□□□□ -0.92
SMC5-203ENST00000475540 ENPP3O14638 875 aa9.3□□□□□ -0.92
SMC5-203ENST00000475540 KRT37O76014 449 aa9.3□□□□□ -0.92
SMC5-203ENST00000475540 MECP2P51608 486 aaKnown RBP9.3□□□□□ -0.92
SMC5-203ENST00000475540 TMEM132BQ14DG7 1078 aa9.3□□□□□ -0.92
SMC5-203ENST00000475540 DPP8Q6V1X1 898 aaPredicted RBP9.3□□□□□ -0.92
SMC5-203ENST00000475540 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
SMC5-203ENST00000475540 ZCCHC14Q8WYQ9 949 aaKnown RBP9.3□□□□□ -0.92
SMC5-203ENST00000475540 DLG3Q92796 817 aa9.3□□□□□ -0.92
SMC5-203ENST00000475540 LCORQ96JN0 433 aaPredicted RBP9.3□□□□□ -0.92
SMC5-203ENST00000475540 TMA7Q9Y2S6 64 aaKnown RBP9.3□□□□□ -0.92
SMC5-203ENST00000475540 TRAF5O00463 557 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 ZBTB48P10074 688 aaPredicted RBP9.29□□□□□ -0.92
SMC5-203ENST00000475540 PTGS1P23219 599 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 AOAHP28039 575 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 NEK4P51957 841 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 CTSWP56202 376 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 CNNM4Q6P4Q7 775 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
SMC5-203ENST00000475540 YTHDC1Q96MU7 727 aaKnown RBP9.29□□□□□ -0.92
SMC5-203ENST00000475540 TACO1Q9BSH4 297 aaKnown RBP9.29□□□□□ -0.92
SMC5-203ENST00000475540 KCND1Q9NSA2 647 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 PLAAQ9Y263 795 aa9.29□□□□□ -0.92
SMC5-203ENST00000475540 PTPDC1A2A3K4 754 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 FOXP2O15409 715 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 IL18BPO95998 194 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 KIAA0907Q7Z7F0 614 aaPredicted RBP9.28□□□□□ -0.92
SMC5-203ENST00000475540 LRRTM3Q86VH5 581 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 C20orf173Q96LM9 149 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 GBP4Q96PP9 640 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 INCENPQ9NQS7 918 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 GALNT8Q9NY28 637 aa9.28□□□□□ -0.92
SMC5-203ENST00000475540 KNG1P01042 644 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 MMEP08473 750 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 SDHAP31040 664 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 DALRD3Q5D0E6 543 aaKnown RBP9.27□□□□□ -0.93
SMC5-203ENST00000475540 TAF7LQ5H9L4 462 aa9.27□□□□□ -0.93
SMC5-203ENST00000475540 FSTL4Q6MZW2 842 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms