RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 KCNJ6P48051 423 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 WDR5P61964 334 aaKnown RBP13.97□□□□□ -0.17
SSR1-205ENST00000475213 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 AKAP17AQ02040 695 aaKnown RBP13.97□□□□□ -0.17
SSR1-205ENST00000475213 PPP2R2DQ66LE6 453 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 HERC6Q8IVU3 1022 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 LMBR1Q8WVP7 490 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 GAS2L1Q99501 681 aaPredicted RBP13.97□□□□□ -0.17
SSR1-205ENST00000475213 SLC26A6Q9BXS9 759 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 RNF26Q9BY78 433 aaPredicted RBP13.97□□□□□ -0.17
SSR1-205ENST00000475213 UPF3BQ9BZI7 483 aaKnown RBP13.97□□□□□ -0.17
SSR1-205ENST00000475213 AGO4Q9HCK5 861 aaKnown RBP13.97□□□□□ -0.17
SSR1-205ENST00000475213 C6orf50Q9HD87 102 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
SSR1-205ENST00000475213 EMSYQ7Z589 1322 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 NRCAMQ92823 1304 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 ABHD14A-ACY1A0A1B0GW23 586 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 FAM86B1E9PN63 330 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 CAND2O75155 1236 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 LGR5O75473 907 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 CA3P07451 260 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 CYP3A4P08684 503 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 FAM86B2P0C5J1 330 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 MARK3P27448 753 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 ZNF76P36508 570 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 ITGB3BPQ13352 177 aaPredicted RBP13.96□□□□□ -0.17
SSR1-205ENST00000475213 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.96□□□□□ -0.17
SSR1-205ENST00000475213 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 GLG1Q92896 1179 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 PCYT2Q99447 389 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 SDF4Q9BRK5 362 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 LARP6Q9BRS8 491 aaKnown RBP13.96□□□□□ -0.17
SSR1-205ENST00000475213 SMARCAD1Q9H4L7 1026 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 SIP14410 1827 aa13.96□□□□□ -0.17
SSR1-205ENST00000475213 MYH9P35579 1960 aaKnown RBP13.96□□□□□ -0.18
SSR1-205ENST00000475213 WDR81Q562E7 1941 aa13.96□□□□□ -0.18
SSR1-205ENST00000475213 KIF28PB7ZC32 967 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 CTSHP09668 335 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 GNA11P29992 359 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 ACTR2P61160 394 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 DEFB103AP81534 67 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 IKBKEQ14164 716 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 ADGRE1Q14246 886 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 GRIK4Q16099 956 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 NIPA1Q7RTP0 329 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 TMCO2Q7Z6W1 182 aaPredicted RBP13.95□□□□□ -0.18
SSR1-205ENST00000475213 PLA2G4DQ86XP0 818 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 REXO1Q8N1G1 1221 aaKnown RBP13.95□□□□□ -0.18
SSR1-205ENST00000475213 ZNF274Q96GC6 653 aaPredicted RBP13.95□□□□□ -0.18
SSR1-205ENST00000475213 PDRG1Q9NUG6 133 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 VPS54Q9P1Q0 977 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 REV3LO60673 3130 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 LOXHD1Q8IVV2 1947 aa13.95□□□□□ -0.18
SSR1-205ENST00000475213 CUL9Q8IWT3 2517 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 IGLV3-22A0A075B6J6 115 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 TLL1O43897 1013 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 EFCAB14O75071 495 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 ARHGEF15O94989 841 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 VCANP13611 3396 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
SSR1-205ENST00000475213 PLEKHG4Q58EX7 1191 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 MCTP2Q6DN12 878 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 RUFY4Q6ZNE9 571 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 USP38Q8NB14 1042 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 CCDC148Q8NFR7 591 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 DBF4BQ8NFT6 615 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 BICD2Q8TD16 824 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 RASGRP4Q8TDF6 673 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 AZI2Q9H6S1 392 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 SH3GLB2Q9NR46 395 aa13.94□□□□□ -0.18
SSR1-205ENST00000475213 EVPLQ92817 2033 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 PRRC2BQ5JSZ5 2229 aaKnown RBP13.93□□□□□ -0.18
SSR1-205ENST00000475213 MBLAC1A4D2B0 266 aaPredicted RBP13.93□□□□□ -0.18
SSR1-205ENST00000475213 DDX39AO00148 427 aaKnown RBP13.93□□□□□ -0.18
SSR1-205ENST00000475213 DHX15O43143 795 aaKnown RBP13.93□□□□□ -0.18
SSR1-205ENST00000475213 ATG7O95352 703 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 CCNE2O96020 404 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 CENPBP07199 599 aaPredicted RBP13.93□□□□□ -0.18
SSR1-205ENST00000475213 IGFBP4P22692 258 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 TAP1Q03518 808 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 STK3Q13188 491 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 FAM26DQ5JW98 314 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 MARCH8Q5T0T0 291 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.93□□□□□ -0.186e-9■■■■■ 65.2
SSR1-205ENST00000475213 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 RPAINQ86UA6 219 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 TRIM22Q8IYM9 498 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 UIMC1Q96RL1 719 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 CERS4Q9HA82 394 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 TUBE1Q9UJT0 475 aa13.93□□□□□ -0.18
SSR1-205ENST00000475213 IGKV6D-21A0A0A0MT36 114 aa13.92□□□□□ -0.18
SSR1-205ENST00000475213 LCHNA4D1U4 455 aa13.92□□□□□ -0.18
SSR1-205ENST00000475213 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
SSR1-205ENST00000475213 DLL1O00548 723 aa13.92□□□□□ -0.18
SSR1-205ENST00000475213 CPLX1O14810 134 aa13.92□□□□□ -0.18
SSR1-205ENST00000475213 GJB5O95377 273 aa13.92□□□□□ -0.18
SSR1-205ENST00000475213 CHRNA1P02708 482 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms