RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ARRDC4Q8NCT1 418 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 SH3RF2Q8TEC5 729 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 ARMC5Q96C12 935 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 ZNF503Q96F45 646 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 FAM89AQ96GI7 184 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 TMEM169Q96HH4 297 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 DEPDC7Q96QD5 511 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 AARSD1Q9BTE6 412 aaKnown RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 PHF20Q9BVI0 1012 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 C12orf65Q9H3J6 166 aaKnown RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 PIF1Q9H611 641 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 RBPJLQ9UBG7 517 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 TIMM13Q9Y5L4 95 aaPredicted RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 KDM2BQ8NHM5 1336 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 TRAV20A0A0B4J274 112 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 TCRBV5S2A0A599 114 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 FAM83GA6ND36 823 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 ACOT7O00154 380 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 HGSO14964 777 aaPredicted RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 NARSO43776 548 aaKnown RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 DGKIO75912 1065 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 CNOT4O95628 575 aaKnown RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 NUDT3O95989 172 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 LRG1P02750 347 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 AMY2AP04746 511 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 C1SP09871 688 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 NAT2P11245 290 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 COL6A2P12110 1019 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 AMY2BP19961 511 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 GLRBP48167 497 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 SSRP1Q08945 709 aaKnown RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 KCNAB2Q13303 367 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 LSAMPQ13449 338 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 SQSTM1Q13501 440 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 TUBA3CQ13748 450 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 HSP90AA2PQ14568 343 aaPredicted RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 SEC23AQ15436 765 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 TM4SF20Q53R12 229 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 EMC4Q5J8M3 183 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 AGBL4Q5VU57 503 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 NBPF6Q5VWK0 638 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 STEAP3Q658P3 488 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 IGFL4Q6B9Z1 124 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 VASNQ6EMK4 673 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 IQCEQ6IPM2 695 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 STYK1Q6J9G0 422 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 ABHD17CQ6PCB6 329 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 TUBA3EQ6PEY2 450 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 LBX2Q6XYB7 198 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 Q6ZUG5 572 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 USP53Q70EK8 1073 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 GPR155Q7Z3F1 870 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 FGD2Q7Z6J4 655 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 NPM2Q86SE8 214 aaKnown RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 SLC7A14Q8TBB6 771 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 PIP4K2CQ8TBX8 421 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 PMFBP1Q8TBY8 1022 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 ZNF483Q8TF39 744 aaPredicted RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 SREK1Q8WXA9 508 aaKnown RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 CLEC4DQ8WXI8 215 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 KCTD13Q8WZ19 329 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 ZNF669Q96BR6 464 aaPredicted RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 MBD6Q96DN6 1003 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 CLIP3Q96DZ5 547 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 NEIL1Q96FI4 390 aaPredicted RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 SCLYQ96I15 445 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 NBPF4Q96M43 638 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 CCDC140Q96MF4 163 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 CLUHP3Q96NS8 147 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 OR14A2Q96R54 314 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 TTPALQ9BTX7 342 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 TRIM55Q9BYV6 548 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 MEGF9Q9H1U4 602 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 MMRN2Q9H8L6 949 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 IPPKQ9H8X2 491 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 GPR27Q9NS67 375 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 CLDND1Q9NY35 253 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 DTLQ9NZJ0 730 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 SIRPGQ9P1W8 387 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 CDK11AQ9UQ88 783 aaPredicted RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 MRPS23Q9Y3D9 190 aaKnown RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 R3HCC1Q9Y3T6 440 aaKnown RBP1.55□□□□□ -2.16
HDAC9-222ENST00000474742 PCDHB4Q9Y5E5 795 aa1.55□□□□□ -2.16
HDAC9-222ENST00000474742 TRBV23-1A0A0A0MS06 115 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 H7BY64 318 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 SLC27A2O14975 620 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 MAFKO60675 156 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 CDC14BO60729 498 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 RASGRP1O95267 797 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 CRTAMO95727 393 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 CKMP06732 381 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 HIBADHP31937 336 aaKnown RBP1.54□□□□□ -2.16
HDAC9-222ENST00000474742 SLC6A11P48066 632 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 RGS19P49795 217 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 GTF2A2P52657 109 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 GRIN1Q05586 938 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 CRHR2Q13324 411 aa1.54□□□□□ -2.16
HDAC9-222ENST00000474742 BMS1Q14692 1282 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms